Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AL391516.1-201ENST00000554380 2449 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 RNU6-834P-201ENST00000362367 110 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 Y_RNA.120-201ENST00000363304 110 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 U8.5-201ENST00000364528 136 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 SNORA80E-201ENST00000384744 137 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 STAG3L5P-204ENST00000443759 179 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.73□□□□□ -1.97
USP48Q86UV5 RNU6-295P-201ENST00000516901 104 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 MIR4762-201ENST00000585261 75 ntBASIC2.73□□□□□ -1.97
USP48Q86UV5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
USP48Q86UV5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.72□□□□□ -1.97
USP48Q86UV5 Y_RNA.226-201ENST00000364337 114 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 SNORA40.5-201ENST00000391061 128 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 AL158147.1-201ENST00000443970 75 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 RNU2-19P-201ENST00000517288 84 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 AC131055.1-201ENST00000584626 316 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 AC008507.4-201ENST00000585464 127 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.72□□□□□ -1.97
USP48Q86UV5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USP48Q86UV5 RNU6-112P-201ENST00000363599 104 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 RNU6-309P-201ENST00000364573 106 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 MIR221-201ENST00000385135 110 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 Y_RNA.630-201ENST00000411370 108 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.71□□□□□ -1.98
USP48Q86UV5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.71□□□□□ -1.98
USP48Q86UV5 MRPS17P9-201ENST00000511924 393 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 SNORA31.10-201ENST00000516482 106 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.71□□□□□ -1.98
USP48Q86UV5 AC090049.2-201ENST00000550377 109 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 MIR219B-201ENST00000637023 88 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.71□□□□□ -1.98
USP48Q86UV5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.71□□□□□ -1.98
USP48Q86UV5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP48Q86UV5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP48Q86UV5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP48Q86UV5 RNU1-17P-201ENST00000363022 152 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 SNORA1-201ENST00000384107 130 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 MIR802-201ENST00000390235 94 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 U8.13-201ENST00000390842 128 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 SNORD72-201ENST00000390994 80 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 AL034345.1-201ENST00000407768 123 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 SNORD23.1-201ENST00000408212 104 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP48Q86UV5 HSPE1P9-201ENST00000440046 311 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 MIR3914-2-201ENST00000637339 95 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 AC008555.8-201ENST00000623602 2168 ntBASIC2.7□□□□□ -1.98
USP48Q86UV5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP48Q86UV5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 Y_RNA.114-201ENST00000363265 113 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNU6-296P-201ENST00000384608 107 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNY4P18-201ENST00000391107 89 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.69□□□□□ -1.98
USP48Q86UV5 AC055731.1-201ENST00000474387 401 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 AC104435.1-201ENST00000483483 166 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RPL23AP63-201ENST00000498752 471 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 Y_RNA.692-201ENST00000516627 105 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNA5SP481-201ENST00000516814 122 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNU6-365P-201ENST00000517113 106 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 RNA5SP437-201ENST00000517249 129 ntBASIC2.69□□□□□ -1.98
USP48Q86UV5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.69□□□□□ -1.98
USP48Q86UV5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP48Q86UV5 RNU6-153P-201ENST00000364422 104 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 SNORA26.9-201ENST00000391322 122 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 MIR891A-201ENST00000401237 79 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 AL603914.1-201ENST00000401964 204 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.68□□□□□ -1.98
USP48Q86UV5 RNU6-772P-201ENST00000516042 105 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 RN7SKP179-201ENST00000516126 217 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 AL365205.2-201ENST00000594586 68 ntBASIC2.68□□□□□ -1.98
USP48Q86UV5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USP48Q86UV5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP48Q86UV5 Y_RNA.52-201ENST00000362760 96 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 SNORD14E-201ENST00000364009 85 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 SNORA4.2-201ENST00000365313 147 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 RNU6-1056P-201ENST00000383996 107 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 SNORD61-201ENST00000384252 73 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 MIR624-201ENST00000385217 97 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 RNU6-1064P-201ENST00000410626 104 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 Y_RNA.617-201ENST00000410920 90 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 Y_RNA.651-201ENST00000459380 103 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.67□□□□□ -1.98
USP48Q86UV5 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 MIR6129-201ENST00000616087 109 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.67□□□□□ -1.98
USP48Q86UV5 MTND5P32-201ENST00000560711 1802 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 AC092881.1-201ENST00000638218 2733 ntBASIC2.67□□□□□ -1.98
USP48Q86UV5 RNU6-1144P-201ENST00000384247 104 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 MIR548A2-201ENST00000384956 97 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP48Q86UV5 RNA5SP100-201ENST00000410903 110 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 RNA5SP59-201ENST00000410922 110 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.66□□□□□ -1.98
USP48Q86UV5 Y_RNA.757-201ENST00000578934 114 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.66□□□□□ -1.98
USP48Q86UV5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms