| BBS12 | Q6ZW61 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | GNAS-AS1_4.1-201 | ENST00000616546 | 112 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | Y_RNA.122-201 | ENST00000363331 | 96 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | Y_RNA.277-201 | ENST00000364754 | 102 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | AL603825.1-201 | ENST00000438481 | 80 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | AC245047.7-201 | ENST00000440265 | 293 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | RNU6-1132P-201 | ENST00000459214 | 107 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | RN7SKP164-201 | ENST00000516138 | 266 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | U4.1-201 | ENST00000620349 | 87 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| BBS12 | Q6ZW61 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA1.2-201 | ENST00000365189 | 134 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA17.3-201 | ENST00000391159 | 129 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA26-201 | ENST00000391286 | 122 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-651P-201 | ENST00000411040 | 105 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-830P-201 | ENST00000516353 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR3660-201 | ENST00000584845 | 100 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL096861.1-201 | ENST00000610899 | 123 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC068700.1-201 | ENST00000565862 | 3754 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | CEP290-201 | ENST00000309041 | 7616 nt | APPRIS ALT1 TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNA5SP48-201 | ENST00000363969 | 126 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.262-201 | ENST00000364641 | 102 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA25-201 | ENST00000384384 | 134 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-910P-201 | ENST00000390844 | 107 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | U8.17-201 | ENST00000391292 | 132 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC245047.8-201 | ENST00000456455 | 284 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL022345.2-201 | ENST00000606307 | 135 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL365265.1-201 | ENST00000621045 | 234 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | HIF1A-204 | ENST00000539097 | 3956 nt | TSL 1 (best) BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | CEP162-202 | ENST00000403245 | 5156 nt | APPRIS P1 TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORD27-201 | ENST00000363981 | 72 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.304-201 | ENST00000365011 | 112 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR568-201 | ENST00000385036 | 95 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA40.6-201 | ENST00000391153 | 128 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR548O-201 | ENST00000408583 | 114 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-365P-201 | ENST00000517113 | 106 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | LINC01068-202 | ENST00000620874 | 626 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SLC8A1-AS1-230 | ENST00000627538 | 212 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1.31 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-702P-201 | ENST00000364982 | 107 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.350-201 | ENST00000365409 | 98 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.416-201 | ENST00000384014 | 113 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | TRAJ3-201 | ENST00000390534 | 62 nt | APPRIS P1 BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-1299P-201 | ENST00000516316 | 100 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC024382.1-201 | ENST00000520224 | 292 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AP003715.1-201 | ENST00000532109 | 435 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC062037.2-201 | ENST00000610137 | 73 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MT-ATP8-201 | ENST00000361851 | 207 nt | APPRIS P1 BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.199-201 | ENST00000364014 | 102 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.370-201 | ENST00000365589 | 108 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU4-17P-201 | ENST00000365598 | 141 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | SNORA80D-201 | ENST00000384488 | 135 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.572-201 | ENST00000384757 | 98 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR150-201 | ENST00000385048 | 84 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU2-70P-201 | ENST00000410718 | 179 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL583859.1-201 | ENST00000455871 | 335 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU1-92P-201 | ENST00000517017 | 135 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR4421-201 | ENST00000578133 | 69 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC022596.1-201 | ENST00000582895 | 302 nt | TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC008133.2-201 | ENST00000624540 | 351 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MGAT4C-209 | ENST00000611864 | 25116 nt | APPRIS P1 TSL 5 BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.477-201 | ENST00000384352 | 108 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.478-201 | ENST00000384358 | 107 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU6-939P-201 | ENST00000384634 | 107 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.562-201 | ENST00000384695 | 113 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR616-201 | ENST00000385293 | 97 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU2-55P-201 | ENST00000411146 | 174 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL591704.2-201 | ENST00000421658 | 181 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AC108667.1-201 | ENST00000428618 | 249 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU7-41P-201 | ENST00000515917 | 61 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | Y_RNA.668-201 | ENST00000516233 | 93 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU7-25P-201 | ENST00000516544 | 62 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 1.28 | □□□□□ -2.2 | | |