Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
CDHR3Q6ZTQ4 AC120024.3-201ENST00000603167 156 ntBASIC1.23□□□□□ -2.21
CDHR3Q6ZTQ4 AL365265.1-201ENST00000621045 234 ntBASIC1.23□□□□□ -2.21
CDHR3Q6ZTQ4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 RNU6-653P-201ENST00000363074 106 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 RNY1P10-201ENST00000363268 113 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 MT-TT-201ENST00000387460 66 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 SNORD45.4-201ENST00000516629 73 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 RNU6-453P-201ENST00000516819 85 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 AC004817.2-201ENST00000561794 651 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 AL049861.1-201ENST00000603130 150 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 AL021707.8-201ENST00000609428 183 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDHR3Q6ZTQ4 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-163P-201ENST00000384396 106 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 MIR626-201ENST00000385032 94 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-131P-201ENST00000391144 107 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 SNORD58.1-201ENST00000391313 66 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 MIR548H3-201ENST00000408771 118 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-1023P-201ENST00000516137 106 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 AL442067.1-201ENST00000613261 223 ntBASIC1.21□□□□□ -2.22
CDHR3Q6ZTQ4 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 RNY4P28-201ENST00000365281 93 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-144P-201ENST00000383951 107 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 AC245047.8-201ENST00000456455 284 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 MIR4724-201ENST00000579485 89 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 BX284668.6-201ENST00000606899 438 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.2□□□□□ -2.22
CDHR3Q6ZTQ4 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-833P-201ENST00000363486 107 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 MIR516B2-201ENST00000385190 85 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 MIR526A2-201ENST00000390198 65 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 MIR1298-201ENST00000408783 112 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 SNRPGP14-201ENST00000435400 219 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 CYCTP-201ENST00000504253 315 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-922P-201ENST00000516753 99 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 AC008507.4-201ENST00000585464 127 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 AC006006.1-201ENST00000603082 144 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 JPX_2.1-201ENST00000614161 69 ntBASIC1.19□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-379P-201ENST00000363813 104 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-923P-201ENST00000364753 107 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 SNORA20.1-201ENST00000364790 130 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 SNORA8.3-201ENST00000384679 139 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 SNORD41-201ENST00000386967 70 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 MIR891A-201ENST00000401237 79 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.626-201ENST00000411288 95 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-561P-201ENST00000516222 102 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 AC090142.3-201ENST00000519012 385 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 AC078938.1-201ENST00000620993 318 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 AC027279.3-201ENST00000625055 122 ntBASIC1.18□□□□□ -2.22
CDHR3Q6ZTQ4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-493P-201ENST00000391321 108 ntBASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 MIR4308-201ENST00000580634 81 ntBASIC1.17□□□□□ -2.22
CDHR3Q6ZTQ4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 MIR653-201ENST00000385279 96 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-381P-201ENST00000391259 108 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNA5SP247-201ENST00000411181 105 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU7-149P-201ENST00000516739 59 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-388P-201ENST00000517012 105 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-389P-201ENST00000517048 105 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 MIR2681-201ENST00000581814 105 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 FAM106DP-201ENST00000586416 501 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 MIR8070-201ENST00000616510 88 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 uc_338.4-201ENST00000616635 176 ntBASIC1.16□□□□□ -2.22
CDHR3Q6ZTQ4 RNU6-268P-201ENST00000364174 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms