Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC108059.2-201ENST00000434626 151 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RPL22P17-201ENST00000438729 315 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 USP9YP23-201ENST00000455085 407 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 FRG2DP-202ENST00000566967 323 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-86P-201ENST00000606534 107 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 AC099654.12-201ENST00000639868 649 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-708P-201ENST00000384217 107 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-540P-201ENST00000384622 101 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 AL354751.2-201ENST00000415471 210 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 U8.19-201ENST00000459095 133 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 U8.22-201ENST00000459141 133 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 RNU6-410P-201ENST00000517006 107 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 snoU83B.1-201ENST00000517136 88 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 AL133215.3-201ENST00000609801 448 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 uc_338.19-201ENST00000616808 99 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 AL049777.1-201ENST00000622740 518 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 SNORD14E-201ENST00000364009 85 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD116-9-201ENST00000384000 95 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD116-3-201ENST00000384287 95 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD116-8-201ENST00000384365 95 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD116-7-201ENST00000384404 95 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-905P-201ENST00000384434 107 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD116-5-201ENST00000384462 95 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-550P-201ENST00000391057 101 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 MTATP6P18-201ENST00000417994 673 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 USP9YP30-201ENST00000430729 455 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AP000533.3-201ENST00000447704 118 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORA25.10-201ENST00000515926 124 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-958P-201ENST00000516995 106 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 MIR4473-201ENST00000583731 91 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-949P-201ENST00000384040 107 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 MIR1-2-201ENST00000384961 85 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 MIR518B-201ENST00000385127 83 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORA49-201ENST00000386157 136 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU6-757P-201ENST00000410334 100 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AC116353.3-201ENST00000511215 249 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 RNU2-69P-201ENST00000516061 100 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AC022616.6-201ENST00000520479 119 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SCOCP1-201ENST00000554676 349 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 MIR8066-201ENST00000617280 78 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AL512427.1-201ENST00000618593 349 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 AL391262.2-201ENST00000622466 494 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 U6.115-201ENST00000636045 103 ntBASIC-0.88□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-34-201ENST00000362441 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-12-201ENST00000362583 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-29-201ENST00000362834 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-9-201ENST00000362912 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-21-201ENST00000362963 81 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNY1P16-201ENST00000363063 111 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-14-201ENST00000363090 81 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-13-201ENST00000363358 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-11-201ENST00000363616 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-5-201ENST00000363633 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-39-201ENST00000363694 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-4-201ENST00000363810 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-16-201ENST00000363887 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-6-201ENST00000363942 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNA5SP245-201ENST00000364239 121 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-15-201ENST00000364809 81 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-1-201ENST00000364961 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-26-201ENST00000365067 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-10-201ENST00000365073 81 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-43-201ENST00000365503 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-36-201ENST00000365629 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 MTND3P23-201ENST00000431980 347 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 MTCO2P29-201ENST00000465212 189 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 SNORD115-40-201ENST00000606510 82 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 AC011603.4-201ENST00000611325 277 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 MIR588-201ENST00000384900 83 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNU6-325P-201ENST00000411132 105 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 MTCO2P27-201ENST00000420740 428 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 AC080013.3-201ENST00000606839 578 ntBASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.89□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 RNU6-280P-201ENST00000364145 104 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 SNORA27-201ENST00000384323 126 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 AL445193.1-201ENST00000441183 141 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms