Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RNU6-414P-201ENST00000363705 104 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 SNORA1.2-201ENST00000365189 134 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 RNU6-554P-201ENST00000410466 106 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 RNU7-34P-201ENST00000459394 64 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 AC107297.1-201ENST00000459991 176 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 RNU7-123P-201ENST00000515911 60 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 Y_RNA.694-201ENST00000516677 117 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 RNA5SP437-201ENST00000517249 129 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 MIR4709-201ENST00000577272 72 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 U1.36-201ENST00000620684 176 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 AL513423.1-201ENST00000621695 132 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 AL035470.1-201ENST00000622571 220 ntBASIC2.53□□□□□ -2
LRFN4Q6PJG9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
LRFN4Q6PJG9 MIR302B-201ENST00000362188 73 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 MIR342-201ENST00000362212 99 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.163-201ENST00000363702 113 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.362-201ENST00000365518 110 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 RNU6-296P-201ENST00000384608 107 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 MIR136-201ENST00000385207 82 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 MIR1302-5-201ENST00000408164 150 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 snoU13.27-201ENST00000459278 104 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 SCARNA13-201ENST00000516672 275 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 RNU7-181P-201ENST00000517234 74 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 RNU6-94P-201ENST00000607728 107 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
LRFN4Q6PJG9 SNORA63.5-201ENST00000363548 123 ntBASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.323-201ENST00000365157 109 ntBASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 MIR3163-201ENST00000581592 73 ntBASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 AC021506.2-201ENST00000612354 169 ntBASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LRFN4Q6PJG9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 RNU6-766P-201ENST00000362478 107 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 RNU6-1014P-201ENST00000383940 103 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 SNORA70.7-201ENST00000384159 133 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 SNORA44-201ENST00000384584 132 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 SNORA48.2-201ENST00000390926 124 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 AC106754.2-201ENST00000623006 233 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRFN4Q6PJG9 RNU6-1255P-201ENST00000363434 112 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 RNU4-16P-201ENST00000364737 141 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 MIR516B2-201ENST00000385190 85 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 MIR660-201ENST00000385235 97 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 RPL39P34-201ENST00000477141 156 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 RNU2-35P-201ENST00000516446 142 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
LRFN4Q6PJG9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 RNU6-756P-201ENST00000383997 107 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 RNU6-1113P-201ENST00000384348 107 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 MIR128-1-201ENST00000384921 82 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 MT-TI-201ENST00000387365 69 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 RNU2-11P-201ENST00000459191 187 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 AC003982.1-202ENST00000469928 248 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 UBL5P3-201ENST00000475112 231 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.677-201ENST00000516401 85 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 HSPE1P19-201ENST00000603327 295 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 AC021613.1-201ENST00000623880 111 ntBASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
LRFN4Q6PJG9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 SNORA51.5-201ENST00000384126 131 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 MIR548D2-201ENST00000384955 97 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 RNA5SP144-201ENST00000410846 116 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 AL022718.1-201ENST00000412004 84 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 PGBD4P5-201ENST00000445958 426 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 RNA5SP281-201ENST00000516504 135 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 RNU6-537P-201ENST00000517277 103 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.47□□□□□ -2.01
LRFN4Q6PJG9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LRFN4Q6PJG9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LRFN4Q6PJG9 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
LRFN4Q6PJG9 RNU1-138P-201ENST00000384093 164 ntBASIC2.46□□□□□ -2.02
LRFN4Q6PJG9 RNU6-1104P-201ENST00000384723 104 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms