Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 RNY1P13-201ENST00000365030 105 ntBASIC3.34□□□□□ -1.87
LAPTM4AQ15012 AC245047.3-201ENST00000429428 127 ntBASIC3.34□□□□□ -1.87
LAPTM4AQ15012 AC005000.2-201ENST00000605468 310 ntBASIC3.34□□□□□ -1.87
LAPTM4AQ15012 ZYXP1-201ENST00000617638 118 ntBASIC3.34□□□□□ -1.87
LAPTM4AQ15012 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.34□□□□□ -1.87
LAPTM4AQ15012 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LAPTM4AQ15012 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 SNORD36A-201ENST00000362874 73 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 RNU6-1051P-201ENST00000365471 102 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 RNU6-198P-201ENST00000384258 104 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 MIR516A2-201ENST00000384888 90 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 MIR516A1-201ENST00000385033 90 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 RN7SKP220-201ENST00000410611 288 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 AC093850.1-201ENST00000454121 251 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 AC133485.1-201ENST00000567176 124 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 SNORD92-201ENST00000585078 85 ntBASIC3.33□□□□□ -1.88
LAPTM4AQ15012 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
LAPTM4AQ15012 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 SNORA25.5-201ENST00000363782 126 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 MIR518E-201ENST00000385252 88 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 RNU6-628P-201ENST00000410675 107 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 AP000867.2-201ENST00000532468 320 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 AC007224.1-201ENST00000564410 144 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
LAPTM4AQ15012 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LAPTM4AQ15012 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 RNU6-1312P-201ENST00000362425 108 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 RNU6-546P-201ENST00000383991 107 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 RNA5SP109-201ENST00000391010 116 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 RNU6-982P-201ENST00000516216 102 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 MIR548AR-201ENST00000582191 57 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 MIR3140-201ENST00000583685 90 ntBASIC3.31□□□□□ -1.88
LAPTM4AQ15012 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LAPTM4AQ15012 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
LAPTM4AQ15012 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LAPTM4AQ15012 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
LAPTM4AQ15012 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LAPTM4AQ15012 RNU6-753P-201ENST00000363926 107 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 AC027119.1-201ENST00000440877 241 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 RNU7-23P-201ENST00000459465 62 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 RN7SL297P-201ENST00000483161 293 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 RNA5SP468-201ENST00000516782 93 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 MIR2276-201ENST00000516886 89 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 MIR8055-201ENST00000610739 97 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 U6.98-201ENST00000637157 84 ntBASIC3.3□□□□□ -1.88
LAPTM4AQ15012 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 RNU6-957P-201ENST00000363652 99 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 RNA5SP387-201ENST00000364226 106 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 Y_RNA.379-201ENST00000365653 102 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 RNU6-466P-201ENST00000391224 103 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 MIR4286-201ENST00000580651 93 ntBASIC3.29□□□□□ -1.88
LAPTM4AQ15012 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
LAPTM4AQ15012 SRIP3-201ENST00000413200 219 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 AL161788.1-201ENST00000441805 169 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 AC087499.8-201ENST00000578406 226 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 MIR5187-201ENST00000583479 76 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 U4.3-201ENST00000621047 82 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 CR392039.5-201ENST00000623201 510 ntBASIC3.28□□□□□ -1.88
LAPTM4AQ15012 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.28□□□□□ -1.88
LAPTM4AQ15012 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.28□□□□□ -1.88
LAPTM4AQ15012 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAPTM4AQ15012 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAPTM4AQ15012 MIR660-201ENST00000385235 97 ntBASIC3.27□□□□□ -1.89
LAPTM4AQ15012 RNU6-243P-201ENST00000391140 107 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms