Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
SMARCB1Q12824 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNU6-475P-201ENST00000516073 104 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 Y_RNA.715-201ENST00000517082 110 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.59□□□□□ -2.31
SMARCB1Q12824 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.59□□□□□ -2.31
SMARCB1Q12824 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.59□□□□□ -2.32
SMARCB1Q12824 RNU6-442P-201ENST00000383968 104 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 MTCO2P33-201ENST00000402100 465 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.58□□□□□ -2.32
SMARCB1Q12824 Y_RNA.639-201ENST00000458981 102 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.58□□□□□ -2.32
SMARCB1Q12824 RNU4-57P-201ENST00000515980 135 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 RNU6-830P-201ENST00000516353 107 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 RNU6-764P-201ENST00000516396 105 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 SNORD113-5-201ENST00000607261 78 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 Pinc.1-201ENST00000616452 154 ntBASIC0.58□□□□□ -2.32
SMARCB1Q12824 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.58□□□□□ -2.32
SMARCB1Q12824 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
SMARCB1Q12824 SNORD38C-201ENST00000384381 69 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 RNU6-763P-201ENST00000390865 106 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 RNU6-823P-201ENST00000391042 103 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 U8.17-201ENST00000391292 132 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 Y_RNA.602-201ENST00000410535 92 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 AC024067.1-201ENST00000426199 223 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 MTATP6P23-201ENST00000440153 476 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 SEPT14P8-201ENST00000508026 178 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 MRPS35P2-201ENST00000508242 191 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 RNU6-496P-201ENST00000516145 99 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 Y_RNA.714-201ENST00000517065 90 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 MIR548AO-201ENST00000579992 96 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 AC087685.1-201ENST00000587507 141 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 AC104695.3-201ENST00000604052 296 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SMARCB1Q12824 RNU6-474P-201ENST00000384243 107 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 Y_RNA.526-201ENST00000384572 110 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SMARCB1Q12824 SNORD115-46-201ENST00000390982 71 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 RNU6-383P-201ENST00000410864 94 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
SMARCB1Q12824 MTCO1P5-201ENST00000433573 344 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 FABP5P4-201ENST00000437203 171 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 snoU13.21-201ENST00000459368 105 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 RNU6-897P-201ENST00000517135 105 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.56□□□□□ -2.32
SMARCB1Q12824 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 AC012433.1-201ENST00000588916 398 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 AC006441.5-201ENST00000612680 209 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 MIR376A1-201ENST00000616574 68 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 AC015726.2-201ENST00000620112 122 ntBASIC0.56□□□□□ -2.32
SMARCB1Q12824 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 Y_RNA.136-201ENST00000363444 102 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 Y_RNA.393-201ENST00000383936 102 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.55□□□□□ -2.32
SMARCB1Q12824 Y_RNA.637-201ENST00000459424 114 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 AC113410.1-201ENST00000505029 247 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 RNU2-13P-201ENST00000515909 113 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 RNU11-2P-201ENST00000516898 142 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 Y_RNA.713-201ENST00000517013 96 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.55□□□□□ -2.32
SMARCB1Q12824 AC124312.5-201ENST00000604451 268 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 AL021707.8-201ENST00000609428 183 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 MTND1P7-201ENST00000632801 297 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 AL589743.1-201ENST00000551932 2712 ntBASIC0.55□□□□□ -2.32
SMARCB1Q12824 Y_RNA.26-201ENST00000362539 101 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 SNORD45.3-201ENST00000363836 72 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 Y_RNA.445-201ENST00000384168 102 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 Y_RNA.494-201ENST00000384432 111 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 MT-TD-201ENST00000387419 68 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 AC098869.1-201ENST00000481627 292 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 RNU7-25P-201ENST00000516544 62 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 RN7SL793P-201ENST00000583259 296 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 AC022140.2-201ENST00000623500 188 ntBASIC0.54□□□□□ -2.32
SMARCB1Q12824 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SMARCB1Q12824 SNORD114-26-201ENST00000363543 72 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 RNU6-806P-201ENST00000365147 105 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 Y_RNA.424-201ENST00000384063 103 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 SNORA2B-201ENST00000384583 137 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 SNORD111-201ENST00000408139 94 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC090844.1-201ENST00000422019 156 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 U7.7-201ENST00000459276 60 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AL117351.2-201ENST00000513571 157 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 RNU6-1170P-201ENST00000515974 106 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 C8orf59P2-201ENST00000603441 271 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 MIR4791-201ENST00000607666 84 ntBASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.53□□□□□ -2.32
SMARCB1Q12824 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms