Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.88□□□□□ -2.27
GABPAQ06546 Y_RNA.19-201ENST00000362462 99 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 RNU6-770P-201ENST00000363929 105 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 RNU6-268P-201ENST00000364174 107 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 Y_RNA.214-201ENST00000364201 112 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 SNORD28B-201ENST00000390993 75 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 SNORD72-201ENST00000390994 80 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 Y_RNA.581-201ENST00000391017 97 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 RNU6-121P-201ENST00000410525 99 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 ELOCP20-201ENST00000422460 345 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.87□□□□□ -2.27
GABPAQ06546 AC023449.1-201ENST00000454464 154 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.87□□□□□ -2.27
GABPAQ06546 Y_RNA.711-201ENST00000516993 102 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 AC131281.1-201ENST00000522984 164 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 AC008507.4-201ENST00000585464 127 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
GABPAQ06546 Y_RNA.158-201ENST00000363651 101 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 Y_RNA.210-201ENST00000364161 110 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 RNU6-144P-201ENST00000383951 107 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 Y_RNA.455-201ENST00000384230 98 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 MIR215-201ENST00000384858 110 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 U8.17-201ENST00000391292 132 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 Y_RNA.604-201ENST00000410574 102 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 PDCD5P2-201ENST00000507570 312 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 AC023827.1-201ENST00000569247 97 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 MIR3171-201ENST00000584270 74 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 SEPT14P17-201ENST00000617978 177 ntBASIC0.86□□□□□ -2.27
GABPAQ06546 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
GABPAQ06546 RNU6-797P-201ENST00000363101 109 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNA5SP48-201ENST00000363969 126 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNU6-290P-201ENST00000365212 101 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNU6-514P-201ENST00000384208 107 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNU6-1067P-201ENST00000384752 107 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 MIR570-201ENST00000384917 97 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 SNORA53-201ENST00000391141 249 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 MIR1185-1-201ENST00000408598 86 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNU6-383P-201ENST00000410864 94 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 SNRPGP14-201ENST00000435400 219 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.85□□□□□ -2.27
GABPAQ06546 SNORD11-201ENST00000459124 84 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 Y_RNA.637-201ENST00000459424 114 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 RNU2-31P-201ENST00000516954 155 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 AP003716.2-201ENST00000528260 108 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 AC037487.3-201ENST00000606668 112 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
GABPAQ06546 AC015726.2-201ENST00000620112 122 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 AC008133.2-201ENST00000624540 351 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 MIR4251-201ENST00000635819 61 ntBASIC0.85□□□□□ -2.27
GABPAQ06546 SNORA25.1-201ENST00000362326 128 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 snoU2_19.2-201ENST00000363024 80 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 Y_RNA.152-201ENST00000363578 100 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 RNU6-806P-201ENST00000365147 105 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 AL603910.2-201ENST00000407268 136 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 RNU6-830P-201ENST00000516353 107 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.84□□□□□ -2.27
GABPAQ06546 AC020661.2-201ENST00000560114 134 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 AC113195.1-201ENST00000579952 141 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 AL355297.3-201ENST00000604082 446 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 AC013791.1-201ENST00000616619 62 ntBASIC0.84□□□□□ -2.27
GABPAQ06546 Y_RNA.14-201ENST00000362415 103 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.64-201ENST00000362845 102 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.202-201ENST00000364083 110 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.242-201ENST00000364473 110 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.293-201ENST00000364908 93 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 RNU6-662P-201ENST00000384253 104 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.541-201ENST00000384640 113 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 RPL21P38-201ENST00000418090 167 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.83□□□□□ -2.28
GABPAQ06546 MIR5692C2-201ENST00000577959 77 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
GABPAQ06546 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
GABPAQ06546 Y_RNA.26-201ENST00000362539 101 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 RNU6-326P-201ENST00000365480 107 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 MIR508-201ENST00000384857 115 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 BTF3P11-201ENST00000426582 477 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
GABPAQ06546 MTND4LP30-201ENST00000454092 297 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 AC138907.6-201ENST00000568401 126 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 MIR4680-201ENST00000580906 66 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 AC006441.5-201ENST00000612680 209 ntBASIC0.82□□□□□ -2.28
GABPAQ06546 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.82□□□□□ -2.28
GABPAQ06546 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
GABPAQ06546 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 Y_RNA.370-201ENST00000365589 108 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 MIR598-201ENST00000384868 97 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.81□□□□□ -2.28
GABPAQ06546 RPS3AP1-201ENST00000413190 320 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
GABPAQ06546 RNU6-1143P-201ENST00000516125 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms