Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC096949.1-201ENST00000412047 152 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 RNU6-966P-201ENST00000516479 104 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 RNU6-445P-201ENST00000516949 107 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 AC008536.2-201ENST00000607284 349 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 AL662814.1-201ENST00000617364 121 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 SNORD72-201ENST00000390994 80 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 SNORD41.1-201ENST00000391000 69 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 AL603910.2-201ENST00000407268 136 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 USMG5P1-201ENST00000425964 177 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 AC073415.1-201ENST00000449240 153 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 RNU7-161P-201ENST00000517289 62 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 MIR5696-201ENST00000578474 85 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 AL360085.1-201ENST00000604713 532 ntBASIC-1.44□□□□□ -2.64
HIST1H1AQ02539 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 EIF1P2-201ENST00000428233 350 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 RNA5SP476-201ENST00000516613 103 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 SNORA25.16-201ENST00000516741 121 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 MIR4324-201ENST00000584846 72 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 MIR548AB-201ENST00000584917 84 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 AL021368.1-201ENST00000607490 540 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 AP001506.1-201ENST00000615444 211 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 AC073534.2-201ENST00000620377 381 ntBASIC-1.45□□□□□ -2.64
HIST1H1AQ02539 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 MIR587-201ENST00000384845 96 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 RNU6-192P-201ENST00000391253 100 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 AL031003.1-201ENST00000404229 172 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 RNU7-104P-201ENST00000459398 79 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 AC010655.3-201ENST00000478818 450 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 RNU7-25P-201ENST00000516544 62 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 AL391834.2-201ENST00000609982 546 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 uc_338.19-201ENST00000616808 99 ntBASIC-1.46□□□□□ -2.64
HIST1H1AQ02539 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 RNU6-996P-201ENST00000365438 107 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 RNA5SP237-201ENST00000410414 113 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 RNU2-61P-201ENST00000411069 191 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 AL500527.2-201ENST00000454105 95 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 AC011373.1-201ENST00000607270 237 ntBASIC-1.47□□□□□ -2.64
HIST1H1AQ02539 RNY1P16-201ENST00000363063 111 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 RNU6-10P-201ENST00000384036 107 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 AL445193.1-201ENST00000441183 141 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 RNU6-274P-201ENST00000459566 107 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 RNU7-188P-201ENST00000517063 64 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 AL118558.2-201ENST00000556294 238 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 MIR4423-201ENST00000580922 80 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 AL022161.1-201ENST00000604390 213 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.48□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 RNU6-601P-201ENST00000384540 107 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 BX295541.1-201ENST00000417774 250 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 USP9YP30-201ENST00000430729 455 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 CHEK2P4-201ENST00000450340 246 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 AC244505.6-201ENST00000452829 130 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 RNA5SP484-201ENST00000458857 111 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 RNU7-63P-201ENST00000459054 62 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 ACA59.1-201ENST00000515966 143 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 MIR4499-201ENST00000584834 69 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 AC073648.5-201ENST00000603502 305 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 AL157392.4-201ENST00000609756 345 ntBASIC-1.49□□□□□ -2.65
HIST1H1AQ02539 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 MTND1P14-201ENST00000427400 950 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 SNORA40.9-201ENST00000515895 93 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 RNA5SP67-201ENST00000516422 131 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.5□□□□□ -2.65
HIST1H1AQ02539 RNU6-865P-201ENST00000364772 107 ntBASIC-1.51□□□□□ -2.65
HIST1H1AQ02539 SNORA40.5-201ENST00000391061 128 ntBASIC-1.51□□□□□ -2.65
HIST1H1AQ02539 RPL30P15-201ENST00000457129 321 ntBASIC-1.51□□□□□ -2.65
HIST1H1AQ02539 AL356055.1-201ENST00000602528 446 ntBASIC-1.51□□□□□ -2.65
HIST1H1AQ02539 RNU6-509P-201ENST00000363519 107 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 RNU6-24P-201ENST00000384440 107 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 RNU6-906P-201ENST00000384700 70 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 MIR9-2-201ENST00000384838 87 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 AL033528.1-201ENST00000453780 140 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms