Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
CDC42EP1Q00587 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
CDC42EP1Q00587 AC080100.1-201ENST00000624239 5356 ntBASIC1.99□□□□□ -2.09
CDC42EP1Q00587 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDC42EP1Q00587 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 RNU6-833P-201ENST00000363486 107 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 Y_RNA.170-201ENST00000363746 110 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.98□□□□□ -2.09
CDC42EP1Q00587 AC093850.1-201ENST00000454121 251 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 SNORD116-25-201ENST00000516517 92 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 RNU6-504P-201ENST00000516568 104 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 MTND5P41-201ENST00000517498 206 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
CDC42EP1Q00587 MIR4778-201ENST00000577635 80 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDC42EP1Q00587 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 MTND1P7-201ENST00000632801 297 ntBASIC1.98□□□□□ -2.09
CDC42EP1Q00587 MIR424-201ENST00000362227 98 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 Y_RNA.580-201ENST00000391004 95 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 SNRPGP13-201ENST00000442212 177 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 RNU7-121P-201ENST00000516604 62 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 RNU6-1270P-201ENST00000517128 108 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 DNAJC19P2-201ENST00000593340 302 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
CDC42EP1Q00587 AC006441.5-201ENST00000612680 209 ntBASIC1.97□□□□□ -2.09
CDC42EP1Q00587 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDC42EP1Q00587 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CDC42EP1Q00587 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDC42EP1Q00587 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CDC42EP1Q00587 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.96□□□□□ -2.1
CDC42EP1Q00587 RNU6-661P-201ENST00000362409 107 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 Y_RNA.66-201ENST00000362862 102 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 RNU6-268P-201ENST00000364174 107 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 Y_RNA.393-201ENST00000383936 102 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 RNU6-768P-201ENST00000384683 107 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 SNRPGP14-201ENST00000435400 219 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 SUMO1P3-201ENST00000439961 304 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 RNU6-693P-201ENST00000516134 107 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 MIR3658-201ENST00000636291 56 ntBASIC1.96□□□□□ -2.1
CDC42EP1Q00587 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDC42EP1Q00587 RNU6-1123P-201ENST00000362347 106 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 RNU6-151P-201ENST00000364158 107 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 RNU6-978P-201ENST00000364371 103 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 SNORD24-201ENST00000383884 75 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 SNORD61-201ENST00000384252 73 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDC42EP1Q00587 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 SNORD37.2-201ENST00000391075 66 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 MIR548O-201ENST00000408583 114 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 MIR1267-201ENST00000408723 78 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 AC015726.2-201ENST00000620112 122 ntBASIC1.95□□□□□ -2.1
CDC42EP1Q00587 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
CDC42EP1Q00587 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDC42EP1Q00587 RNU1-17P-201ENST00000363022 152 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 RNU6-774P-201ENST00000363238 107 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 MIR452-201ENST00000385020 85 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AL603908.1-201ENST00000406098 201 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 MIR548M-201ENST00000408260 86 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 RNU7-200P-201ENST00000516105 62 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 RNU7-25P-201ENST00000516544 62 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AL365434.2-201ENST00000607979 234 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 Y_RNA.778-201ENST00000620203 90 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 AC095038.3-201ENST00000634439 195 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 MIR6844-201ENST00000637122 62 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.94□□□□□ -2.1
CDC42EP1Q00587 RNU6-199P-201ENST00000362954 107 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RNU6-888P-201ENST00000363010 101 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 SNORA25.7-201ENST00000364375 127 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RNU4-11P-201ENST00000365287 132 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RNU6-597P-201ENST00000365620 102 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 Y_RNA.506-201ENST00000384494 102 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 MIR194-1-201ENST00000384892 85 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 AC004965.1-201ENST00000413033 213 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 AC015922.2-201ENST00000435593 184 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 SUMO2P16-201ENST00000519475 264 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 AC007751.1-201ENST00000529260 376 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
CDC42EP1Q00587 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CDC42EP1Q00587 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDC42EP1Q00587 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms