Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SNORD115-26-201ENST00000365067 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-10-201ENST00000365073 81 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-43-201ENST00000365503 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-36-201ENST00000365629 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU6-154P-201ENST00000384306 106 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU6-136P-201ENST00000384663 107 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 MIR147A-201ENST00000385079 72 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU7-53P-201ENST00000516705 60 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 MIR2681-201ENST00000581814 105 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-40-201ENST00000606510 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 U6.115-201ENST00000636045 103 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU6-723P-201ENST00000383973 107 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 MIR527-201ENST00000385244 85 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 AC090616.2-202ENST00000584248 222 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU7-10P-201ENST00000607194 63 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 AP002782.1-201ENST00000623107 614 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNY3P11-201ENST00000364153 102 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.95□□□□□ -2.56
PRKDCP78527 AP000533.3-201ENST00000447704 118 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 AC245014.2-201ENST00000603689 287 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 AC131235.4-201ENST00000609288 620 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU6-431P-201ENST00000383874 107 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU1-29P-201ENST00000606574 126 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU2-9P-201ENST00000410194 145 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 RNU6-588P-201ENST00000410281 105 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
PRKDCP78527 AL391834.2-201ENST00000609982 546 ntBASIC-0.95□□□□□ -2.56
PRKDCP78527 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU6-437P-201ENST00000459408 95 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AC010598.1-201ENST00000510378 103 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 snoR1.1-201ENST00000628177 80 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AL445984.1-201ENST00000637834 659 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 MIR30D-201ENST00000362283 70 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 RNA5SP133-201ENST00000363368 119 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 TPTE2P5-203ENST00000458118 728 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 snoU13.6-201ENST00000458785 104 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU6-86P-201ENST00000606534 107 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
PRKDCP78527 SNORD115-28-201ENST00000363931 81 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 MIR617-201ENST00000385030 97 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 SNORA40.17-201ENST00000517256 115 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU6-792P-201ENST00000363490 107 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU7-13P-201ENST00000516413 62 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU6-765P-201ENST00000516916 99 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 RNU7-116P-201ENST00000516940 62 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 AL133255.1-201ENST00000606374 441 ntBASIC-0.96□□□□□ -2.56
PRKDCP78527 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 RNU6-727P-201ENST00000363592 107 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 RNU6-708P-201ENST00000384217 107 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 MIR626-201ENST00000385032 94 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 USP9YP12-201ENST00000450481 570 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 RNA5SP20-201ENST00000515976 84 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.97□□□□□ -2.56
PRKDCP78527 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 MIR8066-201ENST00000617280 78 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.97□□□□□ -2.56
PRKDCP78527 RNU4-70P-201ENST00000384579 139 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.97□□□□□ -2.56
PRKDCP78527 RNU6-958P-201ENST00000516995 106 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 MIR382-201ENST00000637119 76 ntBASIC-0.97□□□□□ -2.56
PRKDCP78527 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.97□□□□□ -2.57
PRKDCP78527 SNORD50B-201ENST00000364995 70 ntBASIC-0.97□□□□□ -2.57
PRKDCP78527 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.97□□□□□ -2.57
PRKDCP78527 MTND1P12-201ENST00000455231 147 ntBASIC-0.97□□□□□ -2.57
PRKDCP78527 RNU6-893P-201ENST00000458841 100 ntBASIC-0.97□□□□□ -2.57
PRKDCP78527 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.97□□□□□ -2.57
PRKDCP78527 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-949P-201ENST00000384040 107 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.98□□□□□ -2.57
PRKDCP78527 AC010587.1-201ENST00000505809 469 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU2-13P-201ENST00000515909 113 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-354P-201ENST00000383862 107 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-610P-201ENST00000384264 107 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MIR8485-201ENST00000401372 91 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms