Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 Y_RNA.54-201ENST00000362766 105 ntBASIC1.24□□□□□ -2.21
IRX4P78413 RNU6-574P-201ENST00000384265 107 ntBASIC1.24□□□□□ -2.21
IRX4P78413 Y_RNA.556-201ENST00000384677 113 ntBASIC1.24□□□□□ -2.21
IRX4P78413 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
IRX4P78413 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
IRX4P78413 RNU6-383P-201ENST00000410864 94 ntBASIC1.24□□□□□ -2.21
IRX4P78413 RNU6-651P-201ENST00000411040 105 ntBASIC1.24□□□□□ -2.21
IRX4P78413 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.24□□□□□ -2.21
IRX4P78413 Y_RNA.668-201ENST00000516233 93 ntBASIC1.24□□□□□ -2.21
IRX4P78413 MIR151B-201ENST00000584249 96 ntBASIC1.24□□□□□ -2.21
IRX4P78413 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
IRX4P78413 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
IRX4P78413 Y_RNA.14-201ENST00000362415 103 ntBASIC1.23□□□□□ -2.21
IRX4P78413 Y_RNA.36-201ENST00000362602 112 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-833P-201ENST00000363486 107 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-674P-201ENST00000363831 107 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU4-10P-201ENST00000364383 140 ntBASIC1.23□□□□□ -2.21
IRX4P78413 snoU2-30.1-201ENST00000365012 70 ntBASIC1.23□□□□□ -2.21
IRX4P78413 Y_RNA.352-201ENST00000365439 102 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-969P-201ENST00000383900 105 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-144P-201ENST00000383951 107 ntBASIC1.23□□□□□ -2.21
IRX4P78413 AL603910.2-201ENST00000407268 136 ntBASIC1.23□□□□□ -2.21
IRX4P78413 Y_RNA.590-201ENST00000410140 107 ntBASIC1.23□□□□□ -2.21
IRX4P78413 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.23□□□□□ -2.21
IRX4P78413 SNORD127-201ENST00000458892 86 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-917P-201ENST00000516294 104 ntBASIC1.23□□□□□ -2.21
IRX4P78413 SNORD45.4-201ENST00000516629 73 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RNU6-922P-201ENST00000516753 99 ntBASIC1.23□□□□□ -2.21
IRX4P78413 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
IRX4P78413 Y_RNA.714-201ENST00000517065 90 ntBASIC1.23□□□□□ -2.21
IRX4P78413 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
IRX4P78413 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
IRX4P78413 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
IRX4P78413 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
IRX4P78413 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
IRX4P78413 AC027279.3-201ENST00000625055 122 ntBASIC1.23□□□□□ -2.21
IRX4P78413 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
IRX4P78413 Y_RNA.144-201ENST00000363521 113 ntBASIC1.22□□□□□ -2.21
IRX4P78413 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.22□□□□□ -2.21
IRX4P78413 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
IRX4P78413 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
IRX4P78413 RPL39P38-201ENST00000467018 153 ntBASIC1.22□□□□□ -2.21
IRX4P78413 NDUFA4P2-201ENST00000489989 244 ntBASIC1.22□□□□□ -2.21
IRX4P78413 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
IRX4P78413 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.22□□□□□ -2.21
IRX4P78413 Y_RNA.277-201ENST00000364754 102 ntBASIC1.21□□□□□ -2.22
IRX4P78413 RNU6-702P-201ENST00000364982 107 ntBASIC1.21□□□□□ -2.22
IRX4P78413 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
IRX4P78413 Y_RNA.477-201ENST00000384352 108 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR802-201ENST00000390235 94 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR548H3-201ENST00000408771 118 ntBASIC1.21□□□□□ -2.22
IRX4P78413 HMGN2P32-201ENST00000444648 269 ntBASIC1.21□□□□□ -2.22
IRX4P78413 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
IRX4P78413 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.21□□□□□ -2.22
IRX4P78413 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
IRX4P78413 Y_RNA.679-201ENST00000516416 91 ntBASIC1.21□□□□□ -2.22
IRX4P78413 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.21□□□□□ -2.22
IRX4P78413 MIR4724-201ENST00000579485 89 ntBASIC1.21□□□□□ -2.22
IRX4P78413 MIR4503-201ENST00000582187 83 ntBASIC1.21□□□□□ -2.22
IRX4P78413 AC006006.1-201ENST00000603082 144 ntBASIC1.21□□□□□ -2.22
IRX4P78413 U4.1-201ENST00000620349 87 ntBASIC1.21□□□□□ -2.22
IRX4P78413 7SK.10-201ENST00000621414 298 ntBASIC1.21□□□□□ -2.22
IRX4P78413 Y_RNA.82-201ENST00000363000 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.92-201ENST00000363043 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 SNORD14E-201ENST00000364009 85 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.235-201ENST00000364412 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.306-201ENST00000365015 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.312-201ENST00000365089 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.322-201ENST00000365151 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.452-201ENST00000384202 108 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.562-201ENST00000384695 113 ntBASIC1.2□□□□□ -2.22
IRX4P78413 MIR452-201ENST00000385020 85 ntBASIC1.2□□□□□ -2.22
IRX4P78413 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.650-201ENST00000459002 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.777-201ENST00000516982 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.771-201ENST00000598668 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.802-201ENST00000614892 130 ntBASIC1.2□□□□□ -2.22
IRX4P78413 Y_RNA.789-201ENST00000622480 102 ntBASIC1.2□□□□□ -2.22
IRX4P78413 SNORD27-201ENST00000363981 72 ntBASIC1.19□□□□□ -2.22
IRX4P78413 MIR516B2-201ENST00000385190 85 ntBASIC1.19□□□□□ -2.22
IRX4P78413 snosnR66.1-201ENST00000391095 99 ntBASIC1.19□□□□□ -2.22
IRX4P78413 AL451046.2-201ENST00000403074 277 ntBASIC1.19□□□□□ -2.22
IRX4P78413 MIR1298-201ENST00000408783 112 ntBASIC1.19□□□□□ -2.22
IRX4P78413 RNU6-322P-201ENST00000516010 103 ntBASIC1.19□□□□□ -2.22
IRX4P78413 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
IRX4P78413 AC100767.1-201ENST00000528178 123 ntBASIC1.19□□□□□ -2.22
IRX4P78413 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.19□□□□□ -2.22
IRX4P78413 MIR4643-201ENST00000577473 78 ntBASIC1.19□□□□□ -2.22
IRX4P78413 MIR3149-201ENST00000584629 83 ntBASIC1.19□□□□□ -2.22
IRX4P78413 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
IRX4P78413 AC087685.1-201ENST00000587507 141 ntBASIC1.19□□□□□ -2.22
IRX4P78413 AC062037.2-201ENST00000610137 73 ntBASIC1.19□□□□□ -2.22
IRX4P78413 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.19□□□□□ -2.22
IRX4P78413 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
IRX4P78413 Y_RNA.193-201ENST00000363979 102 ntBASIC1.18□□□□□ -2.22
IRX4P78413 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
IRX4P78413 Y_RNA.350-201ENST00000365409 98 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms