Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RAE1P78406 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
RAE1P78406 RNU6-978P-201ENST00000364371 103 ntBASIC1.7□□□□□ -2.14
RAE1P78406 SNORA70B-201ENST00000384210 135 ntBASIC1.7□□□□□ -2.14
RAE1P78406 SNORD38C-201ENST00000384381 69 ntBASIC1.7□□□□□ -2.14
RAE1P78406 MIR548O-201ENST00000408583 114 ntBASIC1.7□□□□□ -2.14
RAE1P78406 Y_RNA.666-201ENST00000516187 112 ntBASIC1.7□□□□□ -2.14
RAE1P78406 SNORD116-25-201ENST00000516517 92 ntBASIC1.7□□□□□ -2.14
RAE1P78406 AC007751.1-201ENST00000529260 376 ntBASIC1.7□□□□□ -2.14
RAE1P78406 AC104465.1-201ENST00000611365 139 ntBASIC1.7□□□□□ -2.14
RAE1P78406 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.7□□□□□ -2.14
RAE1P78406 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
RAE1P78406 SNORD114-1-201ENST00000362705 72 ntBASIC1.69□□□□□ -2.14
RAE1P78406 RNU6-199P-201ENST00000362954 107 ntBASIC1.69□□□□□ -2.14
RAE1P78406 RNU6-597P-201ENST00000365620 102 ntBASIC1.69□□□□□ -2.14
RAE1P78406 Y_RNA.393-201ENST00000383936 102 ntBASIC1.69□□□□□ -2.14
RAE1P78406 RNU6-804P-201ENST00000384286 107 ntBASIC1.69□□□□□ -2.14
RAE1P78406 AC019129.1-201ENST00000403786 261 ntBASIC1.69□□□□□ -2.14
RAE1P78406 AC093850.1-201ENST00000454121 251 ntBASIC1.69□□□□□ -2.14
RAE1P78406 UBL5P3-201ENST00000475112 231 ntBASIC1.69□□□□□ -2.14
RAE1P78406 RNA5SP182-201ENST00000516064 82 ntBASIC1.69□□□□□ -2.14
RAE1P78406 SNORA44.1-201ENST00000517031 108 ntBASIC1.69□□□□□ -2.14
RAE1P78406 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
RAE1P78406 MIR4298-201ENST00000584380 73 ntBASIC1.69□□□□□ -2.14
RAE1P78406 MTND1P7-201ENST00000632801 297 ntBASIC1.69□□□□□ -2.14
RAE1P78406 RNU6-449P-201ENST00000383914 107 ntBASIC1.68□□□□□ -2.14
RAE1P78406 SNORD61-201ENST00000384252 73 ntBASIC1.68□□□□□ -2.14
RAE1P78406 Y_RNA.521-201ENST00000384560 114 ntBASIC1.68□□□□□ -2.14
RAE1P78406 MIR548A2-201ENST00000384956 97 ntBASIC1.68□□□□□ -2.14
RAE1P78406 MIR513A1-201ENST00000385138 129 ntBASIC1.68□□□□□ -2.14
RAE1P78406 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RAE1P78406 AC015922.2-201ENST00000435593 184 ntBASIC1.68□□□□□ -2.14
RAE1P78406 RN7SL429P-201ENST00000479090 223 ntBASIC1.68□□□□□ -2.14
RAE1P78406 RN7SL489P-201ENST00000486185 223 ntBASIC1.68□□□□□ -2.14
RAE1P78406 RN7SL327P-201ENST00000488659 223 ntBASIC1.68□□□□□ -2.14
RAE1P78406 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.68□□□□□ -2.14
RAE1P78406 RNU6-830P-201ENST00000516353 107 ntBASIC1.68□□□□□ -2.14
RAE1P78406 RNU6-255P-201ENST00000516957 105 ntBASIC1.68□□□□□ -2.14
RAE1P78406 AC090142.3-201ENST00000519012 385 ntBASIC1.68□□□□□ -2.14
RAE1P78406 AC015688.6-201ENST00000577737 104 ntBASIC1.68□□□□□ -2.14
RAE1P78406 DNAJC19P2-201ENST00000593340 302 ntBASIC1.68□□□□□ -2.14
RAE1P78406 RN7SL853P-201ENST00000617250 223 ntBASIC1.68□□□□□ -2.14
RAE1P78406 AC021753.1-201ENST00000635724 168 ntBASIC1.68□□□□□ -2.14
RAE1P78406 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAE1P78406 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
RAE1P78406 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RAE1P78406 RNU6-1130P-201ENST00000365434 107 ntBASIC1.67□□□□□ -2.14
RAE1P78406 Y_RNA.398-201ENST00000383952 99 ntBASIC1.67□□□□□ -2.14
RAE1P78406 SNORD116-18-201ENST00000383961 92 ntBASIC1.67□□□□□ -2.14
RAE1P78406 RNU6-768P-201ENST00000384683 107 ntBASIC1.67□□□□□ -2.14
RAE1P78406 MIR526A1-201ENST00000384897 85 ntBASIC1.67□□□□□ -2.14
RAE1P78406 MIR518F-201ENST00000384973 87 ntBASIC1.67□□□□□ -2.14
RAE1P78406 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
RAE1P78406 RNU2-40P-201ENST00000410833 196 ntBASIC1.67□□□□□ -2.14
RAE1P78406 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
RAE1P78406 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.67□□□□□ -2.14
RAE1P78406 RNU6-693P-201ENST00000516134 107 ntBASIC1.67□□□□□ -2.14
RAE1P78406 RNU7-25P-201ENST00000516544 62 ntBASIC1.67□□□□□ -2.14
RAE1P78406 RNU6-1270P-201ENST00000517128 108 ntBASIC1.67□□□□□ -2.14
RAE1P78406 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
RAE1P78406 AL365205.2-201ENST00000594586 68 ntBASIC1.67□□□□□ -2.14
RAE1P78406 AC015726.2-201ENST00000620112 122 ntBASIC1.67□□□□□ -2.14
RAE1P78406 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
RAE1P78406 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RAE1P78406 Y_RNA.170-201ENST00000363746 110 ntBASIC1.66□□□□□ -2.14
RAE1P78406 Y_RNA.542-201ENST00000384641 111 ntBASIC1.66□□□□□ -2.14
RAE1P78406 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
RAE1P78406 SUMO2P16-201ENST00000519475 264 ntBASIC1.66□□□□□ -2.14
RAE1P78406 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
RAE1P78406 MIR3646-201ENST00000578301 84 ntBASIC1.66□□□□□ -2.14
RAE1P78406 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RAE1P78406 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RAE1P78406 Y_RNA.8-201ENST00000362353 102 ntBASIC1.65□□□□□ -2.15
RAE1P78406 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
RAE1P78406 SNORA25.7-201ENST00000364375 127 ntBASIC1.65□□□□□ -2.15
RAE1P78406 Y_RNA.547-201ENST00000384654 119 ntBASIC1.65□□□□□ -2.15
RAE1P78406 MIR516B2-201ENST00000385190 85 ntBASIC1.65□□□□□ -2.15
RAE1P78406 MIR136-201ENST00000385207 82 ntBASIC1.65□□□□□ -2.15
RAE1P78406 SNORA75.5-201ENST00000391291 81 ntBASIC1.65□□□□□ -2.15
RAE1P78406 MTND5P41-201ENST00000517498 206 ntBASIC1.65□□□□□ -2.15
RAE1P78406 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
RAE1P78406 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
RAE1P78406 Y_RNA.778-201ENST00000620203 90 ntBASIC1.65□□□□□ -2.15
RAE1P78406 MIR3658-201ENST00000636291 56 ntBASIC1.65□□□□□ -2.15
RAE1P78406 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
RAE1P78406 RNA5SP259-201ENST00000365541 109 ntBASIC1.64□□□□□ -2.15
RAE1P78406 RNY1P5-201ENST00000383890 115 ntBASIC1.64□□□□□ -2.15
RAE1P78406 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
RAE1P78406 U8.13-201ENST00000390842 128 ntBASIC1.64□□□□□ -2.15
RAE1P78406 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.64□□□□□ -2.15
RAE1P78406 snoU13.9-201ENST00000458927 103 ntBASIC1.64□□□□□ -2.15
RAE1P78406 RNU7-200P-201ENST00000516105 62 ntBASIC1.64□□□□□ -2.15
RAE1P78406 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.64□□□□□ -2.15
RAE1P78406 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
RAE1P78406 SNORD115-28-201ENST00000363931 81 ntBASIC1.63□□□□□ -2.15
RAE1P78406 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
RAE1P78406 RNU6-1292P-201ENST00000383856 107 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC092991.1-201ENST00000477176 376 ntBASIC1.63□□□□□ -2.15
RAE1P78406 RNU4-57P-201ENST00000515980 135 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms