Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 RNU6-318P-201ENST00000384283 103 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 RNA5SP118-201ENST00000410385 109 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 AC026782.1-201ENST00000512952 449 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 RNU6-408P-201ENST00000515910 100 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.96□□□□□ -2.56
LSM6P62312 AC007751.1-201ENST00000529260 376 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 MIR4636-201ENST00000582271 80 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 AP000942.4-201ENST00000604811 241 ntBASIC-0.96□□□□□ -2.56
LSM6P62312 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-913P-201ENST00000390913 95 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU4-55P-201ENST00000410731 137 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RPL21P38-201ENST00000418090 167 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.97□□□□□ -2.56
LSM6P62312 RNU2-11P-201ENST00000459191 187 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-835P-201ENST00000516974 104 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-897P-201ENST00000517135 105 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 AP003072.1-201ENST00000531740 145 ntBASIC-0.97□□□□□ -2.56
LSM6P62312 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.97□□□□□ -2.56
LSM6P62312 RNU6-403P-201ENST00000363163 104 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 SNORD115-24-201ENST00000363528 82 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 RNU6-306P-201ENST00000384617 107 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 MIR604-201ENST00000384880 94 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.98□□□□□ -2.57
LSM6P62312 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.98□□□□□ -2.57
LSM6P62312 MIR2355-201ENST00000517199 87 ntBASIC-0.98□□□□□ -2.57
LSM6P62312 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 RNU6-535P-201ENST00000384722 107 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.99□□□□□ -2.57
LSM6P62312 AC011352.1-201ENST00000512300 793 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 RNU6-966P-201ENST00000516479 104 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 MIR4677-201ENST00000584153 80 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 MIR3925-201ENST00000584674 77 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 AP003357.1-201ENST00000604497 148 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.99□□□□□ -2.57
LSM6P62312 RNU4-84P-201ENST00000364200 139 ntBASIC-1□□□□□ -2.57
LSM6P62312 SNORD116-11-201ENST00000383882 92 ntBASIC-1□□□□□ -2.57
LSM6P62312 Y_RNA.547-201ENST00000384654 119 ntBASIC-1□□□□□ -2.57
LSM6P62312 RNU6-291P-201ENST00000384720 107 ntBASIC-1□□□□□ -2.57
LSM6P62312 SNORD72-201ENST00000390994 80 ntBASIC-1□□□□□ -2.57
LSM6P62312 AL603910.2-201ENST00000407268 136 ntBASIC-1□□□□□ -2.57
LSM6P62312 Y_RNA.665-201ENST00000516177 98 ntBASIC-1□□□□□ -2.57
LSM6P62312 AC131281.1-201ENST00000522984 164 ntBASIC-1□□□□□ -2.57
LSM6P62312 MTATP6P24-201ENST00000576835 677 ntBASIC-1□□□□□ -2.57
LSM6P62312 AC068137.3-201ENST00000639191 341 ntBASIC-1□□□□□ -2.57
LSM6P62312 RNU4-73P-201ENST00000363164 141 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 SNORD12C-201ENST00000386307 89 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 SNORA40.5-201ENST00000391061 128 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 USP9YP30-201ENST00000430729 455 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 RNU6-436P-201ENST00000516171 114 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 MIR3672-201ENST00000584290 82 ntBASIC-1.01□□□□□ -2.57
LSM6P62312 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.02□□□□□ -2.57
LSM6P62312 SNORA22B-201ENST00000383876 138 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 RNU6-601P-201ENST00000384540 107 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 MIR224-201ENST00000384889 81 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 AL022718.1-201ENST00000412004 84 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 RNU7-25P-201ENST00000516544 62 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 RNU1-54P-201ENST00000517181 120 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 AC024405.2-202ENST00000532731 184 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 AC127455.1-201ENST00000565496 145 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 AC018638.8-201ENST00000588755 281 ntBASIC-1.02□□□□□ -2.57
LSM6P62312 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 Z95118.1-201ENST00000421372 247 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 HMGN1P33-201ENST00000432945 451 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 RNU6-155P-201ENST00000516347 100 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 AL162376.1-201ENST00000624117 175 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 AC073869.9-201ENST00000641610 120 ntBASIC-1.03□□□□□ -2.57
LSM6P62312 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 MIR548L-201ENST00000408303 86 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 MIR548O-201ENST00000408583 114 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 RNA5SP237-201ENST00000410414 113 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 MTND2P22-201ENST00000444325 1033 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 RNU6-437P-201ENST00000459408 95 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 AC114755.3-201ENST00000481111 251 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 RN7SKP298-201ENST00000515950 94 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 AC124312.5-201ENST00000604451 268 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 AL596211.1-201ENST00000569873 2277 ntBASIC-1.04□□□□□ -2.58
LSM6P62312 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.05□□□□□ -2.58
LSM6P62312 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 RNU6-961P-201ENST00000363893 105 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 MTCO3P40-201ENST00000392516 676 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 RPL7P42-201ENST00000481005 679 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 RPS29P24-201ENST00000486345 171 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.05□□□□□ -2.58
LSM6P62312 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.05□□□□□ -2.58
LSM6P62312 RNU6-758P-201ENST00000516292 89 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 AC055872.1-201ENST00000570978 278 ntBASIC-1.05□□□□□ -2.58
LSM6P62312 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms