Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
PER3P56645 MIR613-201ENST00000385248 95 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-360P-201ENST00000390944 104 ntBASIC2.05□□□□□ -2.08
PER3P56645 AC092991.1-201ENST00000477176 376 ntBASIC2.05□□□□□ -2.08
PER3P56645 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-426P-201ENST00000516464 97 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-504P-201ENST00000516568 104 ntBASIC2.05□□□□□ -2.08
PER3P56645 RNU6-1270P-201ENST00000517128 108 ntBASIC2.05□□□□□ -2.08
PER3P56645 AC112693.2-201ENST00000556538 232 ntBASIC2.05□□□□□ -2.08
PER3P56645 MIR3910-1-201ENST00000580936 111 ntBASIC2.05□□□□□ -2.08
PER3P56645 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
PER3P56645 AL773524.1-201ENST00000614065 229 ntBASIC2.05□□□□□ -2.08
PER3P56645 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
PER3P56645 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.05□□□□□ -2.08
PER3P56645 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
PER3P56645 RNU6-704P-201ENST00000364162 103 ntBASIC2.04□□□□□ -2.08
PER3P56645 Y_RNA.251-201ENST00000364551 99 ntBASIC2.04□□□□□ -2.08
PER3P56645 Y_RNA.568-201ENST00000384742 113 ntBASIC2.04□□□□□ -2.08
PER3P56645 MIR518F-201ENST00000384973 87 ntBASIC2.04□□□□□ -2.08
PER3P56645 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
PER3P56645 SNORA75.5-201ENST00000391291 81 ntBASIC2.04□□□□□ -2.08
PER3P56645 SNRPGP13-201ENST00000442212 177 ntBASIC2.04□□□□□ -2.08
PER3P56645 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
PER3P56645 RNA5SP57-201ENST00000459463 123 ntBASIC2.04□□□□□ -2.08
PER3P56645 RNU6-693P-201ENST00000516134 107 ntBASIC2.04□□□□□ -2.08
PER3P56645 AC022254.1-201ENST00000567857 235 ntBASIC2.04□□□□□ -2.08
PER3P56645 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
PER3P56645 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PER3P56645 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PER3P56645 RNU6-833P-201ENST00000363486 107 ntBASIC2.03□□□□□ -2.08
PER3P56645 Y_RNA.242-201ENST00000364473 110 ntBASIC2.03□□□□□ -2.08
PER3P56645 RNU6-203P-201ENST00000384038 104 ntBASIC2.03□□□□□ -2.08
PER3P56645 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PER3P56645 SNORD37.2-201ENST00000391075 66 ntBASIC2.03□□□□□ -2.08
PER3P56645 RPL30P13-201ENST00000418873 348 ntBASIC2.03□□□□□ -2.08
PER3P56645 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.03□□□□□ -2.08
PER3P56645 AC093850.1-201ENST00000454121 251 ntBASIC2.03□□□□□ -2.08
PER3P56645 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
PER3P56645 AC108729.3-201ENST00000513484 108 ntBASIC2.03□□□□□ -2.08
PER3P56645 RNU7-12P-201ENST00000516030 62 ntBASIC2.03□□□□□ -2.08
PER3P56645 SNORA25.12-201ENST00000516202 82 ntBASIC2.03□□□□□ -2.08
PER3P56645 RNU6-406P-201ENST00000516470 107 ntBASIC2.03□□□□□ -2.08
PER3P56645 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
PER3P56645 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
PER3P56645 AL365205.2-201ENST00000594586 68 ntBASIC2.03□□□□□ -2.08
PER3P56645 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.03□□□□□ -2.08
PER3P56645 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
PER3P56645 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.03□□□□□ -2.08
PER3P56645 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
PER3P56645 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PER3P56645 RNU6-199P-201ENST00000362954 107 ntBASIC2.02□□□□□ -2.09
PER3P56645 Y_RNA.140-201ENST00000363474 103 ntBASIC2.02□□□□□ -2.09
PER3P56645 SNORA25.7-201ENST00000364375 127 ntBASIC2.02□□□□□ -2.09
PER3P56645 MIR194-1-201ENST00000384892 85 ntBASIC2.02□□□□□ -2.09
PER3P56645 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.02□□□□□ -2.09
PER3P56645 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PER3P56645 HMGN2P32-201ENST00000444648 269 ntBASIC2.02□□□□□ -2.09
PER3P56645 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
PER3P56645 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
PER3P56645 MIR3129-201ENST00000581095 76 ntBASIC2.02□□□□□ -2.09
PER3P56645 AL513423.1-201ENST00000621695 132 ntBASIC2.02□□□□□ -2.09
PER3P56645 AC095038.3-201ENST00000634439 195 ntBASIC2.02□□□□□ -2.09
PER3P56645 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
PER3P56645 MIR802-201ENST00000390235 94 ntBASIC2.01□□□□□ -2.09
PER3P56645 SNORA26.9-201ENST00000391322 122 ntBASIC2.01□□□□□ -2.09
PER3P56645 MIR891A-201ENST00000401237 79 ntBASIC2.01□□□□□ -2.09
PER3P56645 MIR548O-201ENST00000408583 114 ntBASIC2.01□□□□□ -2.09
PER3P56645 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
PER3P56645 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.01□□□□□ -2.09
PER3P56645 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.01□□□□□ -2.09
PER3P56645 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
PER3P56645 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PER3P56645 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
PER3P56645 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
PER3P56645 Y_RNA.343-201ENST00000365354 112 ntBASIC2□□□□□ -2.09
PER3P56645 RNU6-439P-201ENST00000384188 106 ntBASIC2□□□□□ -2.09
PER3P56645 Y_RNA.497-201ENST00000384447 98 ntBASIC2□□□□□ -2.09
PER3P56645 Y_RNA.547-201ENST00000384654 119 ntBASIC2□□□□□ -2.09
PER3P56645 SNORA20-201ENST00000384662 132 ntBASIC2□□□□□ -2.09
PER3P56645 MIR660-201ENST00000385235 97 ntBASIC2□□□□□ -2.09
PER3P56645 SNORD77.3-201ENST00000391113 65 ntBASIC2□□□□□ -2.09
PER3P56645 MIR513C-201ENST00000401352 84 ntBASIC2□□□□□ -2.09
PER3P56645 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
PER3P56645 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
PER3P56645 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
PER3P56645 AF228730.3-201ENST00000436691 102 ntBASIC2□□□□□ -2.09
PER3P56645 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
PER3P56645 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
PER3P56645 MIR376A2-201ENST00000636782 80 ntBASIC2□□□□□ -2.09
PER3P56645 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
PER3P56645 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
PER3P56645 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PER3P56645 RNU6-460P-201ENST00000391158 108 ntBASIC1.99□□□□□ -2.09
PER3P56645 RNU6-257P-201ENST00000410238 98 ntBASIC1.99□□□□□ -2.09
PER3P56645 AL161935.2-201ENST00000414627 60 ntBASIC1.99□□□□□ -2.09
PER3P56645 AC015922.2-201ENST00000435593 184 ntBASIC1.99□□□□□ -2.09
PER3P56645 AC090142.3-201ENST00000519012 385 ntBASIC1.99□□□□□ -2.09
PER3P56645 MIR4778-201ENST00000577635 80 ntBASIC1.99□□□□□ -2.09
PER3P56645 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
PER3P56645 AP000942.3-201ENST00000603702 160 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms