Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SCARNA8-201ENST00000515924 131 ntBASIC0.69□□□□□ -2.3
LIM2P55344 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
LIM2P55344 MIR2115-201ENST00000516657 100 ntBASIC0.69□□□□□ -2.3
LIM2P55344 RNU6-126P-201ENST00000516685 103 ntBASIC0.69□□□□□ -2.3
LIM2P55344 SNORA40.15-201ENST00000516884 107 ntBASIC0.69□□□□□ -2.3
LIM2P55344 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
LIM2P55344 MIR548AR-201ENST00000582191 57 ntBASIC0.69□□□□□ -2.3
LIM2P55344 AL021707.8-201ENST00000609428 183 ntBASIC0.69□□□□□ -2.3
LIM2P55344 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LIM2P55344 Y_RNA.61-201ENST00000362835 102 ntBASIC0.68□□□□□ -2.3
LIM2P55344 Y_RNA.152-201ENST00000363578 100 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-1048P-201ENST00000364054 107 ntBASIC0.68□□□□□ -2.3
LIM2P55344 Y_RNA.813-201ENST00000364639 102 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU5E-4P-201ENST00000364931 120 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-1138P-201ENST00000365359 106 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-102P-201ENST00000384485 104 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AL603910.2-201ENST00000407268 136 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-397P-201ENST00000516226 104 ntBASIC0.68□□□□□ -2.3
LIM2P55344 Y_RNA.673-201ENST00000516306 88 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-1110P-201ENST00000516462 101 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
LIM2P55344 RNU2-31P-201ENST00000516954 155 ntBASIC0.68□□□□□ -2.3
LIM2P55344 Y_RNA.711-201ENST00000516993 102 ntBASIC0.68□□□□□ -2.3
LIM2P55344 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
LIM2P55344 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
LIM2P55344 MIR4662B-201ENST00000579498 81 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AL512605.2-201ENST00000592972 256 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AL136317.1-201ENST00000612653 226 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AC013791.1-201ENST00000616619 62 ntBASIC0.68□□□□□ -2.3
LIM2P55344 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
LIM2P55344 AC022140.2-201ENST00000623500 188 ntBASIC0.68□□□□□ -2.3
LIM2P55344 MIR377-201ENST00000362145 69 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-1272P-201ENST00000362776 107 ntBASIC0.67□□□□□ -2.3
LIM2P55344 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
LIM2P55344 Y_RNA.269-201ENST00000364685 89 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-867P-201ENST00000364956 107 ntBASIC0.67□□□□□ -2.3
LIM2P55344 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-42P-201ENST00000384165 107 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-514P-201ENST00000384208 107 ntBASIC0.67□□□□□ -2.3
LIM2P55344 Y_RNA.455-201ENST00000384230 98 ntBASIC0.67□□□□□ -2.3
LIM2P55344 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-763P-201ENST00000390865 106 ntBASIC0.67□□□□□ -2.3
LIM2P55344 MTCO2P33-201ENST00000402100 465 ntBASIC0.67□□□□□ -2.3
LIM2P55344 MIR548P-201ENST00000408336 84 ntBASIC0.67□□□□□ -2.3
LIM2P55344 MIR1302-7-201ENST00000408841 72 ntBASIC0.67□□□□□ -2.3
LIM2P55344 Y_RNA.602-201ENST00000410535 92 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU6-847P-201ENST00000411115 108 ntBASIC0.67□□□□□ -2.3
LIM2P55344 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
LIM2P55344 MTND4P29-201ENST00000503122 1372 ntBASIC0.67□□□□□ -2.3
LIM2P55344 SNORA25.1-201ENST00000362326 128 ntBASIC0.66□□□□□ -2.3
LIM2P55344 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
LIM2P55344 SNORD113.3-201ENST00000364630 78 ntBASIC0.66□□□□□ -2.3
LIM2P55344 SNORA51.10-201ENST00000384418 136 ntBASIC0.66□□□□□ -2.3
LIM2P55344 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LIM2P55344 SNORD28B-201ENST00000390993 75 ntBASIC0.66□□□□□ -2.3
LIM2P55344 SNORD72-201ENST00000390994 80 ntBASIC0.66□□□□□ -2.3
LIM2P55344 MIR1278-201ENST00000408753 81 ntBASIC0.66□□□□□ -2.3
LIM2P55344 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.66□□□□□ -2.3
LIM2P55344 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
LIM2P55344 PSMC1P5-201ENST00000512850 177 ntBASIC0.66□□□□□ -2.3
LIM2P55344 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
LIM2P55344 AC036111.3-201ENST00000526389 112 ntBASIC0.66□□□□□ -2.3
LIM2P55344 MIR151B-201ENST00000584249 96 ntBASIC0.66□□□□□ -2.3
LIM2P55344 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
LIM2P55344 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
LIM2P55344 Y_RNA.14-201ENST00000362415 103 ntBASIC0.65□□□□□ -2.31
LIM2P55344 RNU6-770P-201ENST00000363929 105 ntBASIC0.65□□□□□ -2.31
LIM2P55344 RNU6-450P-201ENST00000364654 107 ntBASIC0.65□□□□□ -2.31
LIM2P55344 RNU6-396P-201ENST00000365369 105 ntBASIC0.65□□□□□ -2.31
LIM2P55344 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
LIM2P55344 MIR526A2-201ENST00000390198 65 ntBASIC0.65□□□□□ -2.31
LIM2P55344 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
LIM2P55344 Y_RNA.637-201ENST00000459424 114 ntBASIC0.65□□□□□ -2.31
LIM2P55344 snoU13.18-201ENST00000459483 104 ntBASIC0.65□□□□□ -2.31
LIM2P55344 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
LIM2P55344 MIR5692C2-201ENST00000577959 77 ntBASIC0.65□□□□□ -2.31
LIM2P55344 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
LIM2P55344 uc_338.4-201ENST00000616635 176 ntBASIC0.65□□□□□ -2.31
LIM2P55344 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.65□□□□□ -2.31
LIM2P55344 AC015726.2-201ENST00000620112 122 ntBASIC0.65□□□□□ -2.31
LIM2P55344 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
LIM2P55344 UBE2WP1-201ENST00000362030 340 ntBASIC0.64□□□□□ -2.31
LIM2P55344 MIR367-201ENST00000362299 68 ntBASIC0.64□□□□□ -2.31
LIM2P55344 Y_RNA.168-201ENST00000363740 102 ntBASIC0.64□□□□□ -2.31
LIM2P55344 SNORA22B-201ENST00000383876 138 ntBASIC0.64□□□□□ -2.31
LIM2P55344 Y_RNA.508-201ENST00000384502 114 ntBASIC0.64□□□□□ -2.31
LIM2P55344 RNU6-121P-201ENST00000410525 99 ntBASIC0.64□□□□□ -2.31
LIM2P55344 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
LIM2P55344 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
LIM2P55344 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
LIM2P55344 MRPS35P2-201ENST00000508242 191 ntBASIC0.64□□□□□ -2.31
LIM2P55344 SNORA27.4-201ENST00000516650 95 ntBASIC0.64□□□□□ -2.31
LIM2P55344 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
LIM2P55344 MIR4724-201ENST00000579485 89 ntBASIC0.64□□□□□ -2.31
LIM2P55344 AC113195.1-201ENST00000579952 141 ntBASIC0.64□□□□□ -2.31
LIM2P55344 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
LIM2P55344 Y_RNA.105-201ENST00000363182 111 ntBASIC0.63□□□□□ -2.31
LIM2P55344 Y_RNA.214-201ENST00000364201 112 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 258.8 ms