Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Y_RNA.44-201ENST00000362676 108 ntBASIC1.07□□□□□ -2.24
CDH13P55290 Y_RNA.338-201ENST00000365320 114 ntBASIC1.07□□□□□ -2.24
CDH13P55290 Y_RNA.370-201ENST00000365589 108 ntBASIC1.07□□□□□ -2.24
CDH13P55290 Y_RNA.518-201ENST00000384552 113 ntBASIC1.07□□□□□ -2.24
CDH13P55290 MIR548F4-201ENST00000408515 105 ntBASIC1.07□□□□□ -2.24
CDH13P55290 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
CDH13P55290 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH13P55290 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
CDH13P55290 RN7SKP164-201ENST00000516138 266 ntBASIC1.07□□□□□ -2.24
CDH13P55290 RNU6-126P-201ENST00000516685 103 ntBASIC1.07□□□□□ -2.24
CDH13P55290 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH13P55290 MIR4662B-201ENST00000579498 81 ntBASIC1.07□□□□□ -2.24
CDH13P55290 MIR8062-201ENST00000621515 85 ntBASIC1.07□□□□□ -2.24
CDH13P55290 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDH13P55290 SNORA63C-201ENST00000364578 129 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU6-211P-201ENST00000384047 107 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU6-1289P-201ENST00000384431 106 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU6-1067P-201ENST00000384752 107 ntBASIC1.06□□□□□ -2.24
CDH13P55290 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU7-149P-201ENST00000516739 59 ntBASIC1.06□□□□□ -2.24
CDH13P55290 RNU11-2P-201ENST00000516898 142 ntBASIC1.06□□□□□ -2.24
CDH13P55290 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.06□□□□□ -2.24
CDH13P55290 MIR548AR-201ENST00000582191 57 ntBASIC1.06□□□□□ -2.24
CDH13P55290 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
CDH13P55290 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.06□□□□□ -2.24
CDH13P55290 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CDH13P55290 Y_RNA.237-201ENST00000364439 102 ntBASIC1.05□□□□□ -2.24
CDH13P55290 SNORA1.2-201ENST00000365189 134 ntBASIC1.05□□□□□ -2.24
CDH13P55290 SNORA8.3-201ENST00000384679 139 ntBASIC1.05□□□□□ -2.24
CDH13P55290 Y_RNA.574-201ENST00000384766 95 ntBASIC1.05□□□□□ -2.24
CDH13P55290 MIR1302-6-201ENST00000408466 90 ntBASIC1.05□□□□□ -2.24
CDH13P55290 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
CDH13P55290 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH13P55290 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
CDH13P55290 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.05□□□□□ -2.24
CDH13P55290 MTCO2P24-201ENST00000515611 426 ntBASIC1.05□□□□□ -2.24
CDH13P55290 SNORD77.4-201ENST00000516158 81 ntBASIC1.05□□□□□ -2.24
CDH13P55290 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
CDH13P55290 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH13P55290 AC006006.1-201ENST00000603082 144 ntBASIC1.05□□□□□ -2.24
CDH13P55290 AL359821.1-201ENST00000605519 182 ntBASIC1.05□□□□□ -2.24
CDH13P55290 U2.14-201ENST00000615943 113 ntBASIC1.05□□□□□ -2.24
CDH13P55290 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
CDH13P55290 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
CDH13P55290 Y_RNA.82-201ENST00000363000 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.92-201ENST00000363043 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.176-201ENST00000363815 109 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.235-201ENST00000364412 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.306-201ENST00000365015 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.312-201ENST00000365089 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.322-201ENST00000365151 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.327-201ENST00000365201 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 RNU6-738P-201ENST00000384531 106 ntBASIC1.04□□□□□ -2.24
CDH13P55290 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
CDH13P55290 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
CDH13P55290 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
CDH13P55290 SNORD2.1-201ENST00000458762 69 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.650-201ENST00000459002 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 MTATP8P1-201ENST00000467115 207 ntBASIC1.04□□□□□ -2.24
CDH13P55290 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
CDH13P55290 RNU4-57P-201ENST00000515980 135 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.777-201ENST00000516982 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 AL117187.1-201ENST00000555482 181 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.771-201ENST00000598668 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
CDH13P55290 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
CDH13P55290 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CDH13P55290 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
CDH13P55290 AC015726.2-201ENST00000620112 122 ntBASIC1.04□□□□□ -2.24
CDH13P55290 Y_RNA.789-201ENST00000622480 102 ntBASIC1.04□□□□□ -2.24
CDH13P55290 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDH13P55290 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDH13P55290 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDH13P55290 MIR103A2-201ENST00000362154 78 ntBASIC1.03□□□□□ -2.24
CDH13P55290 RNU6-694P-201ENST00000364071 147 ntBASIC1.03□□□□□ -2.24
CDH13P55290 Y_RNA.537-201ENST00000384626 109 ntBASIC1.03□□□□□ -2.24
CDH13P55290 SNORD28B-201ENST00000390993 75 ntBASIC1.03□□□□□ -2.24
CDH13P55290 MIR1185-1-201ENST00000408598 86 ntBASIC1.03□□□□□ -2.24
CDH13P55290 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.03□□□□□ -2.24
CDH13P55290 RNU6-1053P-201ENST00000515930 101 ntBASIC1.03□□□□□ -2.24
CDH13P55290 AL049861.1-201ENST00000603130 150 ntBASIC1.03□□□□□ -2.24
CDH13P55290 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
CDH13P55290 MIR4251-201ENST00000635819 61 ntBASIC1.03□□□□□ -2.24
CDH13P55290 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDH13P55290 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
CDH13P55290 RNU6-238P-201ENST00000363313 106 ntBASIC1.02□□□□□ -2.25
CDH13P55290 RNU6-740P-201ENST00000364734 105 ntBASIC1.02□□□□□ -2.25
CDH13P55290 MIR626-201ENST00000385032 94 ntBASIC1.02□□□□□ -2.25
CDH13P55290 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.02□□□□□ -2.25
CDH13P55290 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH13P55290 AC008737.2-201ENST00000599446 118 ntBASIC1.02□□□□□ -2.25
CDH13P55290 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
CDH13P55290 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
CDH13P55290 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
CDH13P55290 Y_RNA.461-201ENST00000384263 103 ntBASIC1.01□□□□□ -2.25
CDH13P55290 Y_RNA.512-201ENST00000384518 102 ntBASIC1.01□□□□□ -2.25
CDH13P55290 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
CDH13P55290 MT-TW-201ENST00000387382 68 ntBASIC1.01□□□□□ -2.25
CDH13P55290 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms