Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Y_RNA.259-201ENST00000364619 101 ntBASIC0.21□□□□□ -2.38
CDH6P55285 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
CDH6P55285 RNU2-14P-201ENST00000411053 191 ntBASIC0.21□□□□□ -2.38
CDH6P55285 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
CDH6P55285 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.21□□□□□ -2.38
CDH6P55285 SNORD11-201ENST00000459124 84 ntBASIC0.21□□□□□ -2.38
CDH6P55285 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
CDH6P55285 RN7SL793P-201ENST00000583259 296 ntBASIC0.21□□□□□ -2.38
CDH6P55285 AC005357.1-201ENST00000588399 301 ntBASIC0.21□□□□□ -2.38
CDH6P55285 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
CDH6P55285 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
CDH6P55285 Y_RNA.112-201ENST00000363250 102 ntBASIC0.2□□□□□ -2.38
CDH6P55285 Y_RNA.462-201ENST00000384268 102 ntBASIC0.2□□□□□ -2.38
CDH6P55285 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.2□□□□□ -2.38
CDH6P55285 RNU7-25P-201ENST00000516544 62 ntBASIC0.2□□□□□ -2.38
CDH6P55285 RNU6-1007P-201ENST00000516586 107 ntBASIC0.2□□□□□ -2.38
CDH6P55285 uc_338.6-201ENST00000613544 171 ntBASIC0.2□□□□□ -2.38
CDH6P55285 AC010205.1-201ENST00000616668 449 ntBASIC0.2□□□□□ -2.38
CDH6P55285 AC134878.1-201ENST00000619901 243 ntBASIC0.2□□□□□ -2.38
CDH6P55285 PVT1_3.1-201ENST00000620853 95 ntBASIC0.2□□□□□ -2.38
CDH6P55285 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.2□□□□□ -2.38
CDH6P55285 RNU6-674P-201ENST00000363831 107 ntBASIC0.19□□□□□ -2.38
CDH6P55285 Y_RNA.393-201ENST00000383936 102 ntBASIC0.19□□□□□ -2.38
CDH6P55285 RNU6-1040P-201ENST00000383974 107 ntBASIC0.19□□□□□ -2.38
CDH6P55285 Y_RNA.428-201ENST00000384078 102 ntBASIC0.19□□□□□ -2.38
CDH6P55285 RNU6-937P-201ENST00000384325 106 ntBASIC0.19□□□□□ -2.38
CDH6P55285 RNU6-21P-201ENST00000384710 107 ntBASIC0.19□□□□□ -2.38
CDH6P55285 MIR489-201ENST00000384923 84 ntBASIC0.19□□□□□ -2.38
CDH6P55285 BTF3P11-201ENST00000426582 477 ntBASIC0.19□□□□□ -2.38
CDH6P55285 AC091959.1-201ENST00000495857 238 ntBASIC0.19□□□□□ -2.38
CDH6P55285 SNORA18.4-201ENST00000516440 124 ntBASIC0.19□□□□□ -2.38
CDH6P55285 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.19□□□□□ -2.38
CDH6P55285 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNU4-80P-201ENST00000363200 141 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNU4-50P-201ENST00000364361 141 ntBASIC0.18□□□□□ -2.38
CDH6P55285 Y_RNA.242-201ENST00000364473 110 ntBASIC0.18□□□□□ -2.38
CDH6P55285 SNORA72.4-201ENST00000384174 132 ntBASIC0.18□□□□□ -2.38
CDH6P55285 SNORD116-29-201ENST00000384516 83 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
CDH6P55285 Y_RNA.551-201ENST00000384661 102 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNY4P36-201ENST00000391116 96 ntBASIC0.18□□□□□ -2.38
CDH6P55285 MTND1P14-201ENST00000427400 950 ntBASIC0.18□□□□□ -2.38
CDH6P55285 AC236972.2-201ENST00000434979 310 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNU7-56P-201ENST00000458744 62 ntBASIC0.18□□□□□ -2.38
CDH6P55285 RNU7-67P-201ENST00000459003 62 ntBASIC0.18□□□□□ -2.38
CDH6P55285 snoU13.16-201ENST00000459350 104 ntBASIC0.18□□□□□ -2.38
CDH6P55285 AC010655.3-201ENST00000478818 450 ntBASIC0.18□□□□□ -2.38
CDH6P55285 SNORA25.12-201ENST00000516202 82 ntBASIC0.18□□□□□ -2.38
CDH6P55285 SNORD116.3-201ENST00000517176 78 ntBASIC0.18□□□□□ -2.38
CDH6P55285 AC010332.2-201ENST00000613083 1904 ntBASIC0.18□□□□□ -2.38
CDH6P55285 Y_RNA.241-201ENST00000364470 117 ntBASIC0.17□□□□□ -2.38
CDH6P55285 RNA5SP517-201ENST00000364724 117 ntBASIC0.17□□□□□ -2.38
CDH6P55285 Y_RNA.458-201ENST00000384240 102 ntBASIC0.17□□□□□ -2.38
CDH6P55285 Y_RNA.463-201ENST00000384271 102 ntBASIC0.17□□□□□ -2.38
CDH6P55285 Y_RNA.547-201ENST00000384654 119 ntBASIC0.17□□□□□ -2.38
CDH6P55285 MIR193B-201ENST00000384907 83 ntBASIC0.17□□□□□ -2.38
CDH6P55285 MIR938-201ENST00000401216 83 ntBASIC0.17□□□□□ -2.38
CDH6P55285 MIR548O-201ENST00000408583 114 ntBASIC0.17□□□□□ -2.38
CDH6P55285 SNORD71-201ENST00000411292 86 ntBASIC0.17□□□□□ -2.38
CDH6P55285 AC107297.1-201ENST00000459991 176 ntBASIC0.17□□□□□ -2.38
CDH6P55285 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
CDH6P55285 AC092794.1-201ENST00000612734 582 ntBASIC0.17□□□□□ -2.38
CDH6P55285 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.17□□□□□ -2.38
CDH6P55285 RNU6-801P-201ENST00000364087 105 ntBASIC0.16□□□□□ -2.38
CDH6P55285 Y_RNA.248-201ENST00000364501 109 ntBASIC0.16□□□□□ -2.38
CDH6P55285 Y_RNA.813-201ENST00000364639 102 ntBASIC0.16□□□□□ -2.38
CDH6P55285 Y_RNA.383-201ENST00000383855 97 ntBASIC0.16□□□□□ -2.38
CDH6P55285 Y_RNA.494-201ENST00000384432 111 ntBASIC0.16□□□□□ -2.38
CDH6P55285 MIR518A1-201ENST00000385068 85 ntBASIC0.16□□□□□ -2.38
CDH6P55285 SNORA26.5-201ENST00000391215 123 ntBASIC0.16□□□□□ -2.38
CDH6P55285 RNU2-70P-201ENST00000410718 179 ntBASIC0.16□□□□□ -2.38
CDH6P55285 POLR2KP2-201ENST00000438155 177 ntBASIC0.16□□□□□ -2.38
CDH6P55285 SNRPGP12-201ENST00000449481 213 ntBASIC0.16□□□□□ -2.38
CDH6P55285 RPS29P30-201ENST00000600975 111 ntBASIC0.16□□□□□ -2.38
CDH6P55285 AC008608.1-201ENST00000603910 127 ntBASIC0.16□□□□□ -2.38
CDH6P55285 AL121655.1-201ENST00000605811 308 ntBASIC0.16□□□□□ -2.38
CDH6P55285 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CDH6P55285 AC025253.1-201ENST00000613623 543 ntBASIC0.16□□□□□ -2.38
CDH6P55285 MIR6740-201ENST00000618268 113 ntBASIC0.16□□□□□ -2.38
CDH6P55285 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
CDH6P55285 Y_RNA.143-201ENST00000363520 106 ntBASIC0.15□□□□□ -2.39
CDH6P55285 Y_RNA.387-201ENST00000383918 102 ntBASIC0.15□□□□□ -2.39
CDH6P55285 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.15□□□□□ -2.39
CDH6P55285 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
CDH6P55285 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.15□□□□□ -2.39
CDH6P55285 RNU6-958P-201ENST00000516995 106 ntBASIC0.15□□□□□ -2.39
CDH6P55285 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
CDH6P55285 AC092447.9-201ENST00000603395 144 ntBASIC0.15□□□□□ -2.39
CDH6P55285 AL355297.3-201ENST00000604082 446 ntBASIC0.15□□□□□ -2.39
CDH6P55285 SNORA25.18-201ENST00000607153 114 ntBASIC0.15□□□□□ -2.39
CDH6P55285 U6atac.1-201ENST00000616025 117 ntBASIC0.15□□□□□ -2.39
CDH6P55285 AC104985.2-201ENST00000620598 500 ntBASIC0.15□□□□□ -2.39
CDH6P55285 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.15□□□□□ -2.39
CDH6P55285 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
CDH6P55285 SNORD44.1-201ENST00000363202 61 ntBASIC0.14□□□□□ -2.39
CDH6P55285 SNORA63C-201ENST00000364578 129 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RNY3-201ENST00000365484 102 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CDH6P55285 SNORA24-201ENST00000384096 131 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms