Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MIR613-201ENST00000385248 95 ntBASIC0.47□□□□□ -2.33
CDH4P55283 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
CDH4P55283 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
CDH4P55283 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
CDH4P55283 RNU2-13P-201ENST00000515909 113 ntBASIC0.47□□□□□ -2.33
CDH4P55283 RNU4-57P-201ENST00000515980 135 ntBASIC0.47□□□□□ -2.33
CDH4P55283 RNU7-181P-201ENST00000517234 74 ntBASIC0.47□□□□□ -2.33
CDH4P55283 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH4P55283 RPL23AP91-201ENST00000569211 455 ntBASIC0.47□□□□□ -2.33
CDH4P55283 AC005357.1-201ENST00000588399 301 ntBASIC0.47□□□□□ -2.33
CDH4P55283 AL080274.1-201ENST00000605565 220 ntBASIC0.47□□□□□ -2.33
CDH4P55283 AC006441.5-201ENST00000612680 209 ntBASIC0.47□□□□□ -2.33
CDH4P55283 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH4P55283 RNU6-369P-201ENST00000362515 102 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.222-201ENST00000364264 102 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.356-201ENST00000365475 113 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.370-201ENST00000365589 108 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.471-201ENST00000384312 102 ntBASIC0.46□□□□□ -2.34
CDH4P55283 RNU6-342P-201ENST00000384521 104 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.537-201ENST00000384626 109 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.579-201ENST00000390939 94 ntBASIC0.46□□□□□ -2.34
CDH4P55283 RNU6-1009P-201ENST00000390996 107 ntBASIC0.46□□□□□ -2.34
CDH4P55283 MIR1827-201ENST00000408549 66 ntBASIC0.46□□□□□ -2.34
CDH4P55283 AC236972.2-201ENST00000434979 310 ntBASIC0.46□□□□□ -2.34
CDH4P55283 RNU6-496P-201ENST00000516145 99 ntBASIC0.46□□□□□ -2.34
CDH4P55283 RNU6-191P-201ENST00000516295 94 ntBASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.713-201ENST00000517013 96 ntBASIC0.46□□□□□ -2.34
CDH4P55283 AC040926.1-201ENST00000530195 238 ntBASIC0.46□□□□□ -2.34
CDH4P55283 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
CDH4P55283 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
CDH4P55283 MIR2681-201ENST00000581814 105 ntBASIC0.46□□□□□ -2.34
CDH4P55283 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.46□□□□□ -2.34
CDH4P55283 AC012433.1-201ENST00000588916 398 ntBASIC0.46□□□□□ -2.34
CDH4P55283 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
CDH4P55283 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
CDH4P55283 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
CDH4P55283 Y_RNA.197-201ENST00000364004 102 ntBASIC0.45□□□□□ -2.34
CDH4P55283 Y_RNA.418-201ENST00000384029 102 ntBASIC0.45□□□□□ -2.34
CDH4P55283 Y_RNA.526-201ENST00000384572 110 ntBASIC0.45□□□□□ -2.34
CDH4P55283 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
CDH4P55283 SNORD105-201ENST00000386910 85 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR1302-11-201ENST00000408051 138 ntBASIC0.45□□□□□ -2.34
CDH4P55283 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR1302-9-201ENST00000408365 138 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR1302-10-201ENST00000408734 138 ntBASIC0.45□□□□□ -2.34
CDH4P55283 AC005534.2-201ENST00000431047 433 ntBASIC0.45□□□□□ -2.34
CDH4P55283 POLR2KP2-201ENST00000438155 177 ntBASIC0.45□□□□□ -2.34
CDH4P55283 SEPT14P8-201ENST00000508026 178 ntBASIC0.45□□□□□ -2.34
CDH4P55283 RNU6-475P-201ENST00000516073 104 ntBASIC0.45□□□□□ -2.34
CDH4P55283 RNU6-1046P-201ENST00000516538 107 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR2115-201ENST00000516657 100 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR1302-2-201ENST00000607096 138 ntBASIC0.45□□□□□ -2.34
CDH4P55283 SNORD113-5-201ENST00000607261 78 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MIR4791-201ENST00000607666 84 ntBASIC0.45□□□□□ -2.34
CDH4P55283 AC006157.1-201ENST00000611750 366 ntBASIC0.45□□□□□ -2.34
CDH4P55283 AC007485.1-201ENST00000616755 206 ntBASIC0.45□□□□□ -2.34
CDH4P55283 MTND1P7-201ENST00000632801 297 ntBASIC0.45□□□□□ -2.34
CDH4P55283 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.44□□□□□ -2.34
CDH4P55283 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
CDH4P55283 SNORD45.3-201ENST00000363836 72 ntBASIC0.44□□□□□ -2.34
CDH4P55283 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
CDH4P55283 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
CDH4P55283 SNORA51.10-201ENST00000384418 136 ntBASIC0.44□□□□□ -2.34
CDH4P55283 Y_RNA.540-201ENST00000384638 111 ntBASIC0.44□□□□□ -2.34
CDH4P55283 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
CDH4P55283 MIR802-201ENST00000390235 94 ntBASIC0.44□□□□□ -2.34
CDH4P55283 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
CDH4P55283 MTND5P20-201ENST00000448677 143 ntBASIC0.44□□□□□ -2.34
CDH4P55283 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.44□□□□□ -2.34
CDH4P55283 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CDH4P55283 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.44□□□□□ -2.34
CDH4P55283 AC104695.3-201ENST00000604052 296 ntBASIC0.44□□□□□ -2.34
CDH4P55283 AC015726.2-201ENST00000620112 122 ntBASIC0.44□□□□□ -2.34
CDH4P55283 uc_338.22-201ENST00000622722 187 ntBASIC0.44□□□□□ -2.34
CDH4P55283 MIR1-1-201ENST00000362147 71 ntBASIC0.43□□□□□ -2.34
CDH4P55283 RNU6-396P-201ENST00000365369 105 ntBASIC0.43□□□□□ -2.34
CDH4P55283 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
CDH4P55283 AC022140.2-201ENST00000623500 188 ntBASIC0.43□□□□□ -2.34
CDH4P55283 RNU4-73P-201ENST00000363164 141 ntBASIC0.42□□□□□ -2.34
CDH4P55283 Y_RNA.393-201ENST00000383936 102 ntBASIC0.42□□□□□ -2.34
CDH4P55283 Y_RNA.395-201ENST00000383945 109 ntBASIC0.42□□□□□ -2.34
CDH4P55283 RNY3P14-201ENST00000384309 102 ntBASIC0.42□□□□□ -2.34
CDH4P55283 RNU6-102P-201ENST00000384485 104 ntBASIC0.42□□□□□ -2.34
CDH4P55283 RNU6-763P-201ENST00000390865 106 ntBASIC0.42□□□□□ -2.34
CDH4P55283 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
CDH4P55283 HSPE1P25-201ENST00000455484 251 ntBASIC0.42□□□□□ -2.34
CDH4P55283 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
CDH4P55283 MTND3P22-201ENST00000510932 243 ntBASIC0.42□□□□□ -2.34
CDH4P55283 RNU6-764P-201ENST00000516396 105 ntBASIC0.42□□□□□ -2.34
CDH4P55283 Y_RNA.702-201ENST00000516843 96 ntBASIC0.42□□□□□ -2.34
CDH4P55283 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.42□□□□□ -2.34
CDH4P55283 RN7SL793P-201ENST00000583259 296 ntBASIC0.42□□□□□ -2.34
CDH4P55283 MIR4795-201ENST00000584182 89 ntBASIC0.42□□□□□ -2.34
CDH4P55283 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CDH4P55283 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDH4P55283 Y_RNA.136-201ENST00000363444 102 ntBASIC0.41□□□□□ -2.34
CDH4P55283 SNORD113-8-201ENST00000363497 74 ntBASIC0.41□□□□□ -2.34
CDH4P55283 SNORA1.2-201ENST00000365189 134 ntBASIC0.41□□□□□ -2.34
CDH4P55283 Y_RNA.494-201ENST00000384432 111 ntBASIC0.41□□□□□ -2.34
CDH4P55283 Y_RNA.547-201ENST00000384654 119 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms