Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AC006441.5-201ENST00000612680 209 ntBASIC0.72□□□□□ -2.29
CASP9P55211 RNU6-654P-201ENST00000364373 107 ntBASIC0.71□□□□□ -2.3
CASP9P55211 Y_RNA.242-201ENST00000364473 110 ntBASIC0.71□□□□□ -2.3
CASP9P55211 SNORD42.2-201ENST00000365570 69 ntBASIC0.71□□□□□ -2.3
CASP9P55211 SNORA63.7-201ENST00000365579 123 ntBASIC0.71□□□□□ -2.3
CASP9P55211 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
CASP9P55211 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
CASP9P55211 RNA5SP95-201ENST00000410319 137 ntBASIC0.71□□□□□ -2.3
CASP9P55211 AC005534.2-201ENST00000431047 433 ntBASIC0.71□□□□□ -2.3
CASP9P55211 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
CASP9P55211 RNU6-1007P-201ENST00000516586 107 ntBASIC0.71□□□□□ -2.3
CASP9P55211 Y_RNA.136-201ENST00000363444 102 ntBASIC0.7□□□□□ -2.3
CASP9P55211 RNU6-1048P-201ENST00000364054 107 ntBASIC0.7□□□□□ -2.3
CASP9P55211 SNORA26.5-201ENST00000391215 123 ntBASIC0.7□□□□□ -2.3
CASP9P55211 U8.17-201ENST00000391292 132 ntBASIC0.7□□□□□ -2.3
CASP9P55211 AL603910.2-201ENST00000407268 136 ntBASIC0.7□□□□□ -2.3
CASP9P55211 MIR1278-201ENST00000408753 81 ntBASIC0.7□□□□□ -2.3
CASP9P55211 RNU6-613P-201ENST00000410412 108 ntBASIC0.7□□□□□ -2.3
CASP9P55211 MTND4P19-201ENST00000446659 478 ntBASIC0.7□□□□□ -2.3
CASP9P55211 Y_RNA.639-201ENST00000458981 102 ntBASIC0.7□□□□□ -2.3
CASP9P55211 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.7□□□□□ -2.3
CASP9P55211 RNU6-1170P-201ENST00000515974 106 ntBASIC0.7□□□□□ -2.3
CASP9P55211 RNU6-191P-201ENST00000516295 94 ntBASIC0.7□□□□□ -2.3
CASP9P55211 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
CASP9P55211 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
CASP9P55211 RPL23AP91-201ENST00000569211 455 ntBASIC0.7□□□□□ -2.3
CASP9P55211 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.7□□□□□ -2.3
CASP9P55211 MIR6516-201ENST00000630554 81 ntBASIC0.7□□□□□ -2.3
CASP9P55211 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.69□□□□□ -2.3
CASP9P55211 Y_RNA.418-201ENST00000384029 102 ntBASIC0.69□□□□□ -2.3
CASP9P55211 SNORA2B-201ENST00000384583 137 ntBASIC0.69□□□□□ -2.3
CASP9P55211 RNU6-1067P-201ENST00000384752 107 ntBASIC0.69□□□□□ -2.3
CASP9P55211 MIR193B-201ENST00000384907 83 ntBASIC0.69□□□□□ -2.3
CASP9P55211 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
CASP9P55211 RNU6-1046P-201ENST00000516538 107 ntBASIC0.69□□□□□ -2.3
CASP9P55211 MIR4300-201ENST00000581016 96 ntBASIC0.69□□□□□ -2.3
CASP9P55211 Y_RNA.804-201ENST00000615262 101 ntBASIC0.69□□□□□ -2.3
CASP9P55211 AC015726.2-201ENST00000620112 122 ntBASIC0.69□□□□□ -2.3
CASP9P55211 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CASP9P55211 SNORD113-8-201ENST00000363497 74 ntBASIC0.68□□□□□ -2.3
CASP9P55211 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
CASP9P55211 Y_RNA.813-201ENST00000364639 102 ntBASIC0.68□□□□□ -2.3
CASP9P55211 Y_RNA.445-201ENST00000384168 102 ntBASIC0.68□□□□□ -2.3
CASP9P55211 Y_RNA.537-201ENST00000384626 109 ntBASIC0.68□□□□□ -2.3
CASP9P55211 SNORD72-201ENST00000390994 80 ntBASIC0.68□□□□□ -2.3
CASP9P55211 MTCO2P33-201ENST00000402100 465 ntBASIC0.68□□□□□ -2.3
CASP9P55211 HSPE1P25-201ENST00000455484 251 ntBASIC0.68□□□□□ -2.3
CASP9P55211 AC104695.3-201ENST00000604052 296 ntBASIC0.68□□□□□ -2.3
CASP9P55211 Y_RNA.183-201ENST00000363882 113 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU6-899P-201ENST00000363947 107 ntBASIC0.67□□□□□ -2.3
CASP9P55211 Y_RNA.424-201ENST00000384063 103 ntBASIC0.67□□□□□ -2.3
CASP9P55211 Y_RNA.431-201ENST00000384086 102 ntBASIC0.67□□□□□ -2.3
CASP9P55211 SNORD115-46-201ENST00000390982 71 ntBASIC0.67□□□□□ -2.3
CASP9P55211 Y_RNA.645-201ENST00000391229 102 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CASP9P55211 AC098869.1-201ENST00000481627 292 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU6-496P-201ENST00000516145 99 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU6-764P-201ENST00000516396 105 ntBASIC0.67□□□□□ -2.3
CASP9P55211 MIR2115-201ENST00000516657 100 ntBASIC0.67□□□□□ -2.3
CASP9P55211 C8orf59P2-201ENST00000603441 271 ntBASIC0.67□□□□□ -2.3
CASP9P55211 MIR376A1-201ENST00000616574 68 ntBASIC0.67□□□□□ -2.3
CASP9P55211 AC090971.5-201ENST00000621102 293 ntBASIC0.67□□□□□ -2.3
CASP9P55211 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
CASP9P55211 AC090574.1-201ENST00000623186 233 ntBASIC0.67□□□□□ -2.3
CASP9P55211 RNU6-144P-201ENST00000383951 107 ntBASIC0.66□□□□□ -2.3
CASP9P55211 RNU6-102P-201ENST00000384485 104 ntBASIC0.66□□□□□ -2.3
CASP9P55211 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.66□□□□□ -2.3
CASP9P55211 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
CASP9P55211 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.66□□□□□ -2.3
CASP9P55211 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
CASP9P55211 Y_RNA.715-201ENST00000517082 110 ntBASIC0.66□□□□□ -2.3
CASP9P55211 RNU7-181P-201ENST00000517234 74 ntBASIC0.66□□□□□ -2.3
CASP9P55211 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.66□□□□□ -2.3
CASP9P55211 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.66□□□□□ -2.3
CASP9P55211 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
CASP9P55211 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CASP9P55211 MIR369-201ENST00000362155 70 ntBASIC0.65□□□□□ -2.31
CASP9P55211 SNORA1.2-201ENST00000365189 134 ntBASIC0.65□□□□□ -2.31
CASP9P55211 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
CASP9P55211 MIR1827-201ENST00000408549 66 ntBASIC0.65□□□□□ -2.31
CASP9P55211 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
CASP9P55211 MIR1273G-201ENST00000577677 100 ntBASIC0.65□□□□□ -2.31
CASP9P55211 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
CASP9P55211 AC124312.5-201ENST00000604451 268 ntBASIC0.65□□□□□ -2.31
CASP9P55211 RAC1P9-201ENST00000604990 392 ntBASIC0.65□□□□□ -2.31
CASP9P55211 MIR4791-201ENST00000607666 84 ntBASIC0.65□□□□□ -2.31
CASP9P55211 AL021707.8-201ENST00000609428 183 ntBASIC0.65□□□□□ -2.31
CASP9P55211 RNU4-90P-201ENST00000362773 141 ntBASIC0.64□□□□□ -2.31
CASP9P55211 Y_RNA.168-201ENST00000363740 102 ntBASIC0.64□□□□□ -2.31
CASP9P55211 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CASP9P55211 SNORA51.10-201ENST00000384418 136 ntBASIC0.64□□□□□ -2.31
CASP9P55211 MT-TN-201ENST00000387400 73 ntBASIC0.64□□□□□ -2.31
CASP9P55211 RNU6-763P-201ENST00000390865 106 ntBASIC0.64□□□□□ -2.31
CASP9P55211 RNU6-308P-201ENST00000390957 107 ntBASIC0.64□□□□□ -2.31
CASP9P55211 PMCHL1-202ENST00000423102 261 ntBASIC0.64□□□□□ -2.31
CASP9P55211 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.64□□□□□ -2.31
CASP9P55211 AC022140.2-201ENST00000623500 188 ntBASIC0.64□□□□□ -2.31
CASP9P55211 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CASP9P55211 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms