Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
PMS2P54278 Y_RNA.580-201ENST00000391004 95 ntBASIC1.72□□□□□ -2.13
PMS2P54278 Y_RNA.587-201ENST00000391210 103 ntBASIC1.72□□□□□ -2.13
PMS2P54278 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
PMS2P54278 MIR1267-201ENST00000408723 78 ntBASIC1.72□□□□□ -2.13
PMS2P54278 RNU5E-9P-201ENST00000411164 104 ntBASIC1.72□□□□□ -2.13
PMS2P54278 RNA5SP153-201ENST00000516498 76 ntBASIC1.72□□□□□ -2.13
PMS2P54278 RNU7-121P-201ENST00000516604 62 ntBASIC1.72□□□□□ -2.13
PMS2P54278 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
PMS2P54278 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.72□□□□□ -2.13
PMS2P54278 MIR4662B-201ENST00000579498 81 ntBASIC1.72□□□□□ -2.13
PMS2P54278 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PMS2P54278 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
PMS2P54278 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
PMS2P54278 Y_RNA.242-201ENST00000364473 110 ntBASIC1.71□□□□□ -2.14
PMS2P54278 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
PMS2P54278 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
PMS2P54278 RNU6-561P-201ENST00000516222 102 ntBASIC1.71□□□□□ -2.14
PMS2P54278 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
PMS2P54278 MIR4709-201ENST00000577272 72 ntBASIC1.71□□□□□ -2.14
PMS2P54278 MIR4781-201ENST00000585250 76 ntBASIC1.71□□□□□ -2.14
PMS2P54278 AC008507.4-201ENST00000585464 127 ntBASIC1.71□□□□□ -2.14
PMS2P54278 AL049861.1-201ENST00000603130 150 ntBASIC1.71□□□□□ -2.14
PMS2P54278 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
PMS2P54278 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
PMS2P54278 MIRLET7C-201ENST00000362160 84 ntBASIC1.7□□□□□ -2.14
PMS2P54278 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
PMS2P54278 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
PMS2P54278 MIR15B-201ENST00000385045 98 ntBASIC1.7□□□□□ -2.14
PMS2P54278 RNU6-239P-201ENST00000390990 99 ntBASIC1.7□□□□□ -2.14
PMS2P54278 RPL30P13-201ENST00000418873 348 ntBASIC1.7□□□□□ -2.14
PMS2P54278 RNU7-149P-201ENST00000516739 59 ntBASIC1.7□□□□□ -2.14
PMS2P54278 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
PMS2P54278 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
PMS2P54278 AC097639.2-201ENST00000603159 172 ntBASIC1.7□□□□□ -2.14
PMS2P54278 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.7□□□□□ -2.14
PMS2P54278 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
PMS2P54278 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
PMS2P54278 SNORD45.3-201ENST00000363836 72 ntBASIC1.69□□□□□ -2.14
PMS2P54278 Y_RNA.265-201ENST00000364677 108 ntBASIC1.69□□□□□ -2.14
PMS2P54278 Y_RNA.272-201ENST00000364696 102 ntBASIC1.69□□□□□ -2.14
PMS2P54278 SNORA4.2-201ENST00000365313 147 ntBASIC1.69□□□□□ -2.14
PMS2P54278 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
PMS2P54278 RNU6-131P-201ENST00000391144 107 ntBASIC1.69□□□□□ -2.14
PMS2P54278 AL034345.1-201ENST00000407768 123 ntBASIC1.69□□□□□ -2.14
PMS2P54278 SEPT7P4-201ENST00000437076 306 ntBASIC1.69□□□□□ -2.14
PMS2P54278 AL121914.1-201ENST00000450188 156 ntBASIC1.69□□□□□ -2.14
PMS2P54278 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
PMS2P54278 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.69□□□□□ -2.14
PMS2P54278 RNU6-1299P-201ENST00000516316 100 ntBASIC1.69□□□□□ -2.14
PMS2P54278 RNU6-197P-201ENST00000516680 100 ntBASIC1.69□□□□□ -2.14
PMS2P54278 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.69□□□□□ -2.14
PMS2P54278 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.69□□□□□ -2.14
PMS2P54278 MIR4255-201ENST00000579351 72 ntBASIC1.69□□□□□ -2.14
PMS2P54278 MIR3144-201ENST00000579460 79 ntBASIC1.69□□□□□ -2.14
PMS2P54278 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PMS2P54278 AL442644.1-201ENST00000454390 3105 ntBASIC1.68□□□□□ -2.14
PMS2P54278 Y_RNA.357-201ENST00000365487 109 ntBASIC1.68□□□□□ -2.14
PMS2P54278 RNU6-643P-201ENST00000384018 107 ntBASIC1.68□□□□□ -2.14
PMS2P54278 Y_RNA.432-201ENST00000384087 111 ntBASIC1.68□□□□□ -2.14
PMS2P54278 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
PMS2P54278 BTF3P4-201ENST00000418852 495 ntBASIC1.68□□□□□ -2.14
PMS2P54278 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
PMS2P54278 RNU7-34P-201ENST00000459394 64 ntBASIC1.68□□□□□ -2.14
PMS2P54278 RNU6-255P-201ENST00000516957 105 ntBASIC1.68□□□□□ -2.14
PMS2P54278 Pinc.1-201ENST00000616452 154 ntBASIC1.68□□□□□ -2.14
PMS2P54278 AC027279.3-201ENST00000625055 122 ntBASIC1.68□□□□□ -2.14
PMS2P54278 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
PMS2P54278 MIR337-201ENST00000362281 93 ntBASIC1.67□□□□□ -2.14
PMS2P54278 SNORD68-201ENST00000363214 84 ntBASIC1.67□□□□□ -2.14
PMS2P54278 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
PMS2P54278 Y_RNA.486-201ENST00000384398 107 ntBASIC1.67□□□□□ -2.14
PMS2P54278 SNORA26-201ENST00000391286 122 ntBASIC1.67□□□□□ -2.14
PMS2P54278 STAG3L5P-204ENST00000443759 179 ntBASIC1.67□□□□□ -2.14
PMS2P54278 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
PMS2P54278 Y_RNA.634-201ENST00000364811 113 ntBASIC1.66□□□□□ -2.14
PMS2P54278 Y_RNA.336-201ENST00000365307 109 ntBASIC1.66□□□□□ -2.14
PMS2P54278 RNY1P5-201ENST00000383890 115 ntBASIC1.66□□□□□ -2.14
PMS2P54278 RNU6-424P-201ENST00000384367 105 ntBASIC1.66□□□□□ -2.14
PMS2P54278 RNU6-321P-201ENST00000410912 106 ntBASIC1.66□□□□□ -2.14
PMS2P54278 Y_RNA.622-201ENST00000411091 108 ntBASIC1.66□□□□□ -2.14
PMS2P54278 SNRPGP14-201ENST00000435400 219 ntBASIC1.66□□□□□ -2.14
PMS2P54278 AC099513.1-201ENST00000490423 301 ntBASIC1.66□□□□□ -2.14
PMS2P54278 AC107027.2-201ENST00000512197 115 ntBASIC1.66□□□□□ -2.14
PMS2P54278 SNORD45.4-201ENST00000516629 73 ntBASIC1.66□□□□□ -2.14
PMS2P54278 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
PMS2P54278 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
PMS2P54278 AC006441.5-201ENST00000612680 209 ntBASIC1.66□□□□□ -2.14
PMS2P54278 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PMS2P54278 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
PMS2P54278 RNU6-833P-201ENST00000363486 107 ntBASIC1.65□□□□□ -2.15
PMS2P54278 Y_RNA.170-201ENST00000363746 110 ntBASIC1.65□□□□□ -2.15
PMS2P54278 RNU6-978P-201ENST00000364371 103 ntBASIC1.65□□□□□ -2.15
PMS2P54278 Y_RNA.337-201ENST00000365312 102 ntBASIC1.65□□□□□ -2.15
PMS2P54278 RNU6-746P-201ENST00000384112 109 ntBASIC1.65□□□□□ -2.15
PMS2P54278 RNU6-804P-201ENST00000384286 107 ntBASIC1.65□□□□□ -2.15
PMS2P54278 SNORD72-201ENST00000390994 80 ntBASIC1.65□□□□□ -2.15
PMS2P54278 SNORA79-201ENST00000408376 140 ntBASIC1.65□□□□□ -2.15
PMS2P54278 MLLT10P1-201ENST00000418346 262 ntBASIC1.65□□□□□ -2.15
PMS2P54278 CYCTP-201ENST00000504253 315 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms