Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC015922.2-201ENST00000435593 184 ntBASIC2.12□□□□□ -2.07
NEK4P51957 AC024614.2-201ENST00000577584 372 ntBASIC2.12□□□□□ -2.07
NEK4P51957 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
NEK4P51957 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEK4P51957 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.11□□□□□ -2.07
NEK4P51957 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEK4P51957 Y_RNA.8-201ENST00000362353 102 ntBASIC2.11□□□□□ -2.07
NEK4P51957 Y_RNA.170-201ENST00000363746 110 ntBASIC2.11□□□□□ -2.07
NEK4P51957 RNU6-1130P-201ENST00000365434 107 ntBASIC2.11□□□□□ -2.07
NEK4P51957 RNU6-449P-201ENST00000383914 107 ntBASIC2.11□□□□□ -2.07
NEK4P51957 Y_RNA.393-201ENST00000383936 102 ntBASIC2.11□□□□□ -2.07
NEK4P51957 Y_RNA.398-201ENST00000383952 99 ntBASIC2.11□□□□□ -2.07
NEK4P51957 SNORD38C-201ENST00000384381 69 ntBASIC2.11□□□□□ -2.07
NEK4P51957 Y_RNA.521-201ENST00000384560 114 ntBASIC2.11□□□□□ -2.07
NEK4P51957 MIR548A2-201ENST00000384956 97 ntBASIC2.11□□□□□ -2.07
NEK4P51957 MIR452-201ENST00000385020 85 ntBASIC2.11□□□□□ -2.07
NEK4P51957 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
NEK4P51957 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NEK4P51957 AC019129.1-201ENST00000403786 261 ntBASIC2.11□□□□□ -2.07
NEK4P51957 MIR548O-201ENST00000408583 114 ntBASIC2.11□□□□□ -2.07
NEK4P51957 RPL23AP42-201ENST00000471152 471 ntBASIC2.11□□□□□ -2.07
NEK4P51957 RNU6-693P-201ENST00000516134 107 ntBASIC2.11□□□□□ -2.07
NEK4P51957 MTND5P41-201ENST00000517498 206 ntBASIC2.11□□□□□ -2.07
NEK4P51957 AC090142.3-201ENST00000519012 385 ntBASIC2.11□□□□□ -2.07
NEK4P51957 SUMO2P16-201ENST00000519475 264 ntBASIC2.11□□□□□ -2.07
NEK4P51957 AC007751.1-201ENST00000529260 376 ntBASIC2.11□□□□□ -2.07
NEK4P51957 DNAJC19P2-201ENST00000593340 302 ntBASIC2.11□□□□□ -2.07
NEK4P51957 RNU6-457P-201ENST00000363999 107 ntBASIC2.1□□□□□ -2.07
NEK4P51957 RNU6-768P-201ENST00000384683 107 ntBASIC2.1□□□□□ -2.07
NEK4P51957 MIR518F-201ENST00000384973 87 ntBASIC2.1□□□□□ -2.07
NEK4P51957 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NEK4P51957 RNU6-830P-201ENST00000516353 107 ntBASIC2.1□□□□□ -2.07
NEK4P51957 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
NEK4P51957 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.09□□□□□ -2.07
NEK4P51957 RNU6-199P-201ENST00000362954 107 ntBASIC2.09□□□□□ -2.07
NEK4P51957 SNORD116-18-201ENST00000383961 92 ntBASIC2.09□□□□□ -2.07
NEK4P51957 Y_RNA.547-201ENST00000384654 119 ntBASIC2.09□□□□□ -2.07
NEK4P51957 MIR526A1-201ENST00000384897 85 ntBASIC2.09□□□□□ -2.07
NEK4P51957 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
NEK4P51957 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
NEK4P51957 RNU7-25P-201ENST00000516544 62 ntBASIC2.09□□□□□ -2.07
NEK4P51957 RNU6-1270P-201ENST00000517128 108 ntBASIC2.09□□□□□ -2.07
NEK4P51957 AC015688.6-201ENST00000577737 104 ntBASIC2.09□□□□□ -2.07
NEK4P51957 MIR3618-201ENST00000580330 88 ntBASIC2.09□□□□□ -2.07
NEK4P51957 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
NEK4P51957 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
NEK4P51957 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
NEK4P51957 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
NEK4P51957 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.08□□□□□ -2.08
NEK4P51957 RNU7-200P-201ENST00000516105 62 ntBASIC2.08□□□□□ -2.08
NEK4P51957 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
NEK4P51957 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
NEK4P51957 MIR3646-201ENST00000578301 84 ntBASIC2.08□□□□□ -2.08
NEK4P51957 AL365205.2-201ENST00000594586 68 ntBASIC2.08□□□□□ -2.08
NEK4P51957 MTND1P7-201ENST00000632801 297 ntBASIC2.08□□□□□ -2.08
NEK4P51957 MIR3658-201ENST00000636291 56 ntBASIC2.08□□□□□ -2.08
NEK4P51957 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
NEK4P51957 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
NEK4P51957 SNORA25.7-201ENST00000364375 127 ntBASIC2.07□□□□□ -2.08
NEK4P51957 SNORA1-201ENST00000384107 130 ntBASIC2.07□□□□□ -2.08
NEK4P51957 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
NEK4P51957 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.07□□□□□ -2.08
NEK4P51957 RN7SL429P-201ENST00000479090 223 ntBASIC2.07□□□□□ -2.08
NEK4P51957 RN7SL489P-201ENST00000486185 223 ntBASIC2.07□□□□□ -2.08
NEK4P51957 RN7SL327P-201ENST00000488659 223 ntBASIC2.07□□□□□ -2.08
NEK4P51957 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
NEK4P51957 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
NEK4P51957 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
NEK4P51957 RN7SL853P-201ENST00000617250 223 ntBASIC2.07□□□□□ -2.08
NEK4P51957 Y_RNA.778-201ENST00000620203 90 ntBASIC2.07□□□□□ -2.08
NEK4P51957 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NEK4P51957 Y_RNA.542-201ENST00000384641 111 ntBASIC2.06□□□□□ -2.08
NEK4P51957 MIR516B2-201ENST00000385190 85 ntBASIC2.06□□□□□ -2.08
NEK4P51957 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
NEK4P51957 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
NEK4P51957 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
NEK4P51957 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
NEK4P51957 AC015726.2-201ENST00000620112 122 ntBASIC2.06□□□□□ -2.08
NEK4P51957 AC106754.2-201ENST00000623006 233 ntBASIC2.06□□□□□ -2.08
NEK4P51957 MIR6844-201ENST00000637122 62 ntBASIC2.06□□□□□ -2.08
NEK4P51957 ICE2P2-201ENST00000483823 2787 ntBASIC2.05□□□□□ -2.08
NEK4P51957 AC131280.1-202ENST00000624067 4211 ntBASIC2.05□□□□□ -2.08
NEK4P51957 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NEK4P51957 SNORD115-28-201ENST00000363931 81 ntBASIC2.05□□□□□ -2.08
NEK4P51957 RNU6-151P-201ENST00000364158 107 ntBASIC2.05□□□□□ -2.08
NEK4P51957 SNORA2.2-201ENST00000365473 135 ntBASIC2.05□□□□□ -2.08
NEK4P51957 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
NEK4P51957 RNY1P5-201ENST00000383890 115 ntBASIC2.05□□□□□ -2.08
NEK4P51957 Y_RNA.506-201ENST00000384494 102 ntBASIC2.05□□□□□ -2.08
NEK4P51957 MIR653-201ENST00000385279 96 ntBASIC2.05□□□□□ -2.08
NEK4P51957 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
NEK4P51957 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
NEK4P51957 RNU4-57P-201ENST00000515980 135 ntBASIC2.05□□□□□ -2.08
NEK4P51957 RNU6-818P-201ENST00000364837 108 ntBASIC2.04□□□□□ -2.08
NEK4P51957 RNU6-1292P-201ENST00000383856 107 ntBASIC2.04□□□□□ -2.08
NEK4P51957 Y_RNA.400-201ENST00000383963 111 ntBASIC2.04□□□□□ -2.08
NEK4P51957 SNORA75.5-201ENST00000391291 81 ntBASIC2.04□□□□□ -2.08
NEK4P51957 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.04□□□□□ -2.08
NEK4P51957 AF228730.3-201ENST00000436691 102 ntBASIC2.04□□□□□ -2.08
NEK4P51957 snoU13.9-201ENST00000458927 103 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms