Protein–RNA interactions for Protein: P51955

NEK2, Serine/threonine-protein kinase Nek2, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P51955 7SK.8-201ENST00000612110 250 ntBASIC1.78□□□□□ -2.12
NEK2P51955 7SK.11-201ENST00000615477 250 ntBASIC1.78□□□□□ -2.12
NEK2P51955 AC078938.1-201ENST00000620993 318 ntBASIC1.78□□□□□ -2.12
NEK2P51955 7SK.13-201ENST00000622040 250 ntBASIC1.78□□□□□ -2.12
NEK2P51955 RNU6-1020P-201ENST00000363684 107 ntBASIC1.77□□□□□ -2.13
NEK2P51955 Y_RNA.238-201ENST00000364441 102 ntBASIC1.77□□□□□ -2.13
NEK2P51955 RNU4-70P-201ENST00000384579 139 ntBASIC1.77□□□□□ -2.13
NEK2P51955 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.77□□□□□ -2.13
NEK2P51955 MIR548O-201ENST00000408583 114 ntBASIC1.77□□□□□ -2.13
NEK2P51955 SNRPGP13-201ENST00000442212 177 ntBASIC1.77□□□□□ -2.13
NEK2P51955 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
NEK2P51955 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NEK2P51955 RNU2-4P-201ENST00000606190 192 ntBASIC1.77□□□□□ -2.13
NEK2P51955 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NEK2P51955 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NEK2P51955 AL442644.1-201ENST00000454390 3105 ntBASIC1.76□□□□□ -2.13
NEK2P51955 Y_RNA.571-201ENST00000384753 98 ntBASIC1.76□□□□□ -2.13
NEK2P51955 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
NEK2P51955 MIR504-201ENST00000385065 83 ntBASIC1.76□□□□□ -2.13
NEK2P51955 RNU6-847P-201ENST00000411115 108 ntBASIC1.76□□□□□ -2.13
NEK2P51955 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.76□□□□□ -2.13
NEK2P51955 Y_RNA.797-201ENST00000515977 94 ntBASIC1.76□□□□□ -2.13
NEK2P51955 RNU7-43P-201ENST00000516554 64 ntBASIC1.76□□□□□ -2.13
NEK2P51955 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
NEK2P51955 AC130289.1-201ENST00000577321 73 ntBASIC1.76□□□□□ -2.13
NEK2P51955 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.76□□□□□ -2.13
NEK2P51955 AC092881.1-201ENST00000638218 2733 ntBASIC1.75□□□□□ -2.13
NEK2P51955 SNORD45.3-201ENST00000363836 72 ntBASIC1.75□□□□□ -2.13
NEK2P51955 RNU6-484P-201ENST00000384016 107 ntBASIC1.75□□□□□ -2.13
NEK2P51955 MIR1289-2-201ENST00000408360 111 ntBASIC1.75□□□□□ -2.13
NEK2P51955 SNORD123-201ENST00000459473 70 ntBASIC1.75□□□□□ -2.13
NEK2P51955 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
NEK2P51955 RNU6-504P-201ENST00000516568 104 ntBASIC1.75□□□□□ -2.13
NEK2P51955 MIR4308-201ENST00000580634 81 ntBASIC1.75□□□□□ -2.13
NEK2P51955 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
NEK2P51955 SNORA1.2-201ENST00000365189 134 ntBASIC1.74□□□□□ -2.13
NEK2P51955 SNORD24-201ENST00000383884 75 ntBASIC1.74□□□□□ -2.13
NEK2P51955 RNU6-578P-201ENST00000390980 103 ntBASIC1.74□□□□□ -2.13
NEK2P51955 AL121914.1-201ENST00000450188 156 ntBASIC1.74□□□□□ -2.13
NEK2P51955 SNRPGP8-201ENST00000454064 226 ntBASIC1.74□□□□□ -2.13
NEK2P51955 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
NEK2P51955 Y_RNA.666-201ENST00000516187 112 ntBASIC1.74□□□□□ -2.13
NEK2P51955 RNU6-947P-201ENST00000516264 106 ntBASIC1.74□□□□□ -2.13
NEK2P51955 MIR7843-201ENST00000622274 79 ntBASIC1.74□□□□□ -2.13
NEK2P51955 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NEK2P51955 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
NEK2P51955 Y_RNA.182-201ENST00000363880 111 ntBASIC1.73□□□□□ -2.13
NEK2P51955 Y_RNA.257-201ENST00000364596 102 ntBASIC1.73□□□□□ -2.13
NEK2P51955 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
NEK2P51955 MIR520C-201ENST00000385005 87 ntBASIC1.73□□□□□ -2.13
NEK2P51955 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
NEK2P51955 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.73□□□□□ -2.13
NEK2P51955 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
NEK2P51955 RNU6-197P-201ENST00000516680 100 ntBASIC1.73□□□□□ -2.13
NEK2P51955 AC109810.1-201ENST00000534066 224 ntBASIC1.73□□□□□ -2.13
NEK2P51955 AL160236.1-201ENST00000556317 195 ntBASIC1.73□□□□□ -2.13
NEK2P51955 CYP3A52P-201ENST00000563326 91 ntBASIC1.73□□□□□ -2.13
NEK2P51955 MIR8065-201ENST00000620577 100 ntBASIC1.73□□□□□ -2.13
NEK2P51955 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NEK2P51955 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
NEK2P51955 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
NEK2P51955 Y_RNA.634-201ENST00000364811 113 ntBASIC1.72□□□□□ -2.13
NEK2P51955 Y_RNA.297-201ENST00000364950 91 ntBASIC1.72□□□□□ -2.13
NEK2P51955 Y_RNA.435-201ENST00000384095 112 ntBASIC1.72□□□□□ -2.13
NEK2P51955 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
NEK2P51955 U8.17-201ENST00000391292 132 ntBASIC1.72□□□□□ -2.13
NEK2P51955 AL138752.1-201ENST00000452964 351 ntBASIC1.72□□□□□ -2.13
NEK2P51955 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
NEK2P51955 AC108706.1-201ENST00000611053 297 ntBASIC1.72□□□□□ -2.13
NEK2P51955 Y_RNA.274-201ENST00000364714 101 ntBASIC1.71□□□□□ -2.14
NEK2P51955 Y_RNA.547-201ENST00000384654 119 ntBASIC1.71□□□□□ -2.14
NEK2P51955 RNU4-43P-201ENST00000410628 137 ntBASIC1.71□□□□□ -2.14
NEK2P51955 AC107393.1-201ENST00000512403 346 ntBASIC1.71□□□□□ -2.14
NEK2P51955 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.71□□□□□ -2.14
NEK2P51955 MIR4764-201ENST00000580680 88 ntBASIC1.71□□□□□ -2.14
NEK2P51955 AC097639.2-201ENST00000603159 172 ntBASIC1.71□□□□□ -2.14
NEK2P51955 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
NEK2P51955 Y_RNA.91-201ENST00000363042 107 ntBASIC1.7□□□□□ -2.14
NEK2P51955 SNORD115-28-201ENST00000363931 81 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-200P-201ENST00000364743 107 ntBASIC1.7□□□□□ -2.14
NEK2P51955 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-918P-201ENST00000391219 106 ntBASIC1.7□□□□□ -2.14
NEK2P51955 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.7□□□□□ -2.14
NEK2P51955 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-1270P-201ENST00000517128 108 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-165P-201ENST00000517170 99 ntBASIC1.7□□□□□ -2.14
NEK2P51955 RNU6-275P-201ENST00000364910 107 ntBASIC1.69□□□□□ -2.14
NEK2P51955 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
NEK2P51955 Y_RNA.793-201ENST00000411222 111 ntBASIC1.69□□□□□ -2.14
NEK2P51955 Y_RNA.644-201ENST00000459006 113 ntBASIC1.69□□□□□ -2.14
NEK2P51955 RNU4-57P-201ENST00000515980 135 ntBASIC1.69□□□□□ -2.14
NEK2P51955 Y_RNA.674-201ENST00000516362 113 ntBASIC1.69□□□□□ -2.14
NEK2P51955 Y_RNA.700-201ENST00000516806 100 ntBASIC1.69□□□□□ -2.14
NEK2P51955 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NEK2P51955 Y_RNA.66-201ENST00000362862 102 ntBASIC1.68□□□□□ -2.14
NEK2P51955 Y_RNA.75-201ENST00000362927 97 ntBASIC1.68□□□□□ -2.14
NEK2P51955 RNA5SP48-201ENST00000363969 126 ntBASIC1.68□□□□□ -2.14
NEK2P51955 SNORD61-201ENST00000384252 73 ntBASIC1.68□□□□□ -2.14
NEK2P51955 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 303.9 ms