Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.87□□□□□ -1.95
USP11P51784 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.87□□□□□ -1.95
USP11P51784 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
USP11P51784 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
USP11P51784 RNU6-1084P-201ENST00000362498 107 ntBASIC2.86□□□□□ -1.95
USP11P51784 RNU6-862P-201ENST00000362804 105 ntBASIC2.86□□□□□ -1.95
USP11P51784 RNU1-133P-201ENST00000364867 167 ntBASIC2.86□□□□□ -1.95
USP11P51784 SNORA25B-201ENST00000365507 128 ntBASIC2.86□□□□□ -1.95
USP11P51784 RNU6-573P-201ENST00000383938 106 ntBASIC2.86□□□□□ -1.95
USP11P51784 MIR759-201ENST00000390224 91 ntBASIC2.86□□□□□ -1.95
USP11P51784 SRIP3-201ENST00000413200 219 ntBASIC2.86□□□□□ -1.95
USP11P51784 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.86□□□□□ -1.95
USP11P51784 AC003685.2-201ENST00000422795 395 ntBASIC2.86□□□□□ -1.95
USP11P51784 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.86□□□□□ -1.95
USP11P51784 RNU7-94P-201ENST00000459576 63 ntBASIC2.86□□□□□ -1.95
USP11P51784 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.86□□□□□ -1.95
USP11P51784 SNORA31.4-201ENST00000516049 129 ntBASIC2.86□□□□□ -1.95
USP11P51784 RNA5SP320-201ENST00000516263 124 ntBASIC2.86□□□□□ -1.95
USP11P51784 AP003484.1-201ENST00000530974 250 ntBASIC2.86□□□□□ -1.95
USP11P51784 MALAT1.1-201ENST00000618249 95 ntBASIC2.86□□□□□ -1.95
USP11P51784 CTSLP2-204ENST00000629029 392 ntBASIC2.86□□□□□ -1.95
USP11P51784 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
USP11P51784 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
USP11P51784 Y_RNA.265-201ENST00000364677 108 ntBASIC2.85□□□□□ -1.95
USP11P51784 snoU2-30.1-201ENST00000365012 70 ntBASIC2.85□□□□□ -1.95
USP11P51784 Y_RNA.351-201ENST00000365436 96 ntBASIC2.85□□□□□ -1.95
USP11P51784 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
USP11P51784 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
USP11P51784 RNU6-1275P-201ENST00000391087 107 ntBASIC2.85□□□□□ -1.95
USP11P51784 RNU6-592P-201ENST00000411333 103 ntBASIC2.85□□□□□ -1.95
USP11P51784 RN7SL636P-201ENST00000497504 294 ntBASIC2.85□□□□□ -1.95
USP11P51784 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.85□□□□□ -1.95
USP11P51784 SNORA31.15-201ENST00000516771 132 ntBASIC2.85□□□□□ -1.95
USP11P51784 AC024995.1-201ENST00000523014 93 ntBASIC2.85□□□□□ -1.95
USP11P51784 MIR5194-201ENST00000582634 120 ntBASIC2.85□□□□□ -1.95
USP11P51784 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
USP11P51784 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
USP11P51784 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
USP11P51784 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
USP11P51784 AC091932.4-201ENST00000623386 200 ntBASIC2.85□□□□□ -1.95
USP11P51784 AL162726.3-218ENST00000636401 95 ntBASIC2.85□□□□□ -1.95
USP11P51784 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
USP11P51784 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
USP11P51784 MIR302B-201ENST00000362188 73 ntBASIC2.84□□□□□ -1.95
USP11P51784 Y_RNA.99-201ENST00000363138 105 ntBASIC2.84□□□□□ -1.95
USP11P51784 Y_RNA.220-201ENST00000364244 109 ntBASIC2.84□□□□□ -1.95
USP11P51784 Y_RNA.342-201ENST00000365352 113 ntBASIC2.84□□□□□ -1.95
USP11P51784 RPS3AP1-201ENST00000413190 320 ntBASIC2.84□□□□□ -1.95
USP11P51784 CST2P1-201ENST00000425770 87 ntBASIC2.84□□□□□ -1.95
USP11P51784 RNU7-70P-201ENST00000516941 66 ntBASIC2.84□□□□□ -1.95
USP11P51784 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
USP11P51784 SNORD115-40-201ENST00000606510 82 ntBASIC2.84□□□□□ -1.95
USP11P51784 MIR1245B-201ENST00000636115 69 ntBASIC2.84□□□□□ -1.95
USP11P51784 ICE2P2-201ENST00000483823 2787 ntBASIC2.83□□□□□ -1.96
USP11P51784 AC131280.1-202ENST00000624067 4211 ntBASIC2.83□□□□□ -1.96
USP11P51784 SNORA25.6-201ENST00000364121 118 ntBASIC2.83□□□□□ -1.96
USP11P51784 SNORA80E-201ENST00000384744 137 ntBASIC2.83□□□□□ -1.96
USP11P51784 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.83□□□□□ -1.96
USP11P51784 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
USP11P51784 RNA5SP57-201ENST00000459463 123 ntBASIC2.83□□□□□ -1.96
USP11P51784 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.83□□□□□ -1.96
USP11P51784 MIR3163-201ENST00000581592 73 ntBASIC2.83□□□□□ -1.96
USP11P51784 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
USP11P51784 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
USP11P51784 RNA5SP493-201ENST00000364115 91 ntBASIC2.82□□□□□ -1.96
USP11P51784 Y_RNA.336-201ENST00000365307 109 ntBASIC2.82□□□□□ -1.96
USP11P51784 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
USP11P51784 AL359511.1-201ENST00000402970 211 ntBASIC2.82□□□□□ -1.96
USP11P51784 RN7SKP12-201ENST00000516275 143 ntBASIC2.82□□□□□ -1.96
USP11P51784 SNORA18.7-201ENST00000516910 131 ntBASIC2.82□□□□□ -1.96
USP11P51784 AP003327.1-201ENST00000529684 127 ntBASIC2.82□□□□□ -1.96
USP11P51784 MIR3683-201ENST00000580847 82 ntBASIC2.82□□□□□ -1.96
USP11P51784 AC015726.2-201ENST00000620112 122 ntBASIC2.82□□□□□ -1.96
USP11P51784 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP11P51784 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
USP11P51784 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USP11P51784 Y_RNA.93-201ENST00000363066 109 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU4-16P-201ENST00000364737 141 ntBASIC2.81□□□□□ -1.96
USP11P51784 Y_RNA.466-201ENST00000384294 113 ntBASIC2.81□□□□□ -1.96
USP11P51784 Y_RNA.494-201ENST00000384432 111 ntBASIC2.81□□□□□ -1.96
USP11P51784 SNORA67.4-201ENST00000384688 142 ntBASIC2.81□□□□□ -1.96
USP11P51784 MIR515-2-201ENST00000384883 83 ntBASIC2.81□□□□□ -1.96
USP11P51784 MIR515-1-201ENST00000384884 83 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU6-816P-201ENST00000390914 107 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU6-1268P-201ENST00000391214 107 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU6-1239P-201ENST00000391310 107 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNA5SP508-201ENST00000411327 119 ntBASIC2.81□□□□□ -1.96
USP11P51784 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.81□□□□□ -1.96
USP11P51784 AC087499.4-201ENST00000448505 178 ntBASIC2.81□□□□□ -1.96
USP11P51784 AC107297.1-201ENST00000459991 176 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU7-6P-201ENST00000516845 62 ntBASIC2.81□□□□□ -1.96
USP11P51784 RNU6-1116P-201ENST00000517269 99 ntBASIC2.81□□□□□ -1.96
USP11P51784 AC087741.2-201ENST00000619415 172 ntBASIC2.81□□□□□ -1.96
USP11P51784 AC022513.1-201ENST00000624512 117 ntBASIC2.81□□□□□ -1.96
USP11P51784 MIR2052-201ENST00000636055 55 ntBASIC2.81□□□□□ -1.96
USP11P51784 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
USP11P51784 SNORA63D-201ENST00000364359 132 ntBASIC2.8□□□□□ -1.96
USP11P51784 RNU6-160P-201ENST00000384591 107 ntBASIC2.8□□□□□ -1.96
USP11P51784 RNA5SP109-201ENST00000391010 116 ntBASIC2.8□□□□□ -1.96
USP11P51784 RNA5SP482-201ENST00000391269 118 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms