Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
CDK7P50613 AC027279.3-201ENST00000625055 122 ntBASIC1.66□□□□□ -2.14
CDK7P50613 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
CDK7P50613 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
CDK7P50613 SNORD33-201ENST00000362761 85 ntBASIC1.65□□□□□ -2.15
CDK7P50613 RNU6-833P-201ENST00000363486 107 ntBASIC1.65□□□□□ -2.15
CDK7P50613 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
CDK7P50613 Y_RNA.308-201ENST00000365043 101 ntBASIC1.65□□□□□ -2.15
CDK7P50613 RNU6-442P-201ENST00000383968 104 ntBASIC1.65□□□□□ -2.15
CDK7P50613 Y_RNA.476-201ENST00000384347 108 ntBASIC1.65□□□□□ -2.15
CDK7P50613 MIR516B2-201ENST00000385190 85 ntBASIC1.65□□□□□ -2.15
CDK7P50613 SNX2P2-201ENST00000424553 323 ntBASIC1.65□□□□□ -2.15
CDK7P50613 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
CDK7P50613 HMGN2P32-201ENST00000444648 269 ntBASIC1.65□□□□□ -2.15
CDK7P50613 RNU6-322P-201ENST00000516010 103 ntBASIC1.65□□□□□ -2.15
CDK7P50613 RNU1-92P-201ENST00000517017 135 ntBASIC1.65□□□□□ -2.15
CDK7P50613 MIR4762-201ENST00000585261 75 ntBASIC1.65□□□□□ -2.15
CDK7P50613 AP001485.1-201ENST00000604799 199 ntBASIC1.65□□□□□ -2.15
CDK7P50613 AL157834.3-201ENST00000615543 103 ntBASIC1.65□□□□□ -2.15
CDK7P50613 AC068700.1-201ENST00000565862 3754 ntBASIC1.64□□□□□ -2.15
CDK7P50613 Y_RNA.304-201ENST00000365011 112 ntBASIC1.64□□□□□ -2.15
CDK7P50613 Y_RNA.539-201ENST00000384635 107 ntBASIC1.64□□□□□ -2.15
CDK7P50613 MIR626-201ENST00000385032 94 ntBASIC1.64□□□□□ -2.15
CDK7P50613 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
CDK7P50613 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK7P50613 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.64□□□□□ -2.15
CDK7P50613 RNU4-71P-201ENST00000516258 113 ntBASIC1.64□□□□□ -2.15
CDK7P50613 RNY3P16-201ENST00000516338 101 ntBASIC1.64□□□□□ -2.15
CDK7P50613 RNU6-922P-201ENST00000516753 99 ntBASIC1.64□□□□□ -2.15
CDK7P50613 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
CDK7P50613 MIR4282-201ENST00000583613 67 ntBASIC1.64□□□□□ -2.15
CDK7P50613 AC087685.1-201ENST00000587507 141 ntBASIC1.64□□□□□ -2.15
CDK7P50613 uc_338.4-201ENST00000616635 176 ntBASIC1.64□□□□□ -2.15
CDK7P50613 RNU6-923P-201ENST00000364753 107 ntBASIC1.63□□□□□ -2.15
CDK7P50613 MIR452-201ENST00000385020 85 ntBASIC1.63□□□□□ -2.15
CDK7P50613 RNU6-493P-201ENST00000391321 108 ntBASIC1.63□□□□□ -2.15
CDK7P50613 MIR1298-201ENST00000408783 112 ntBASIC1.63□□□□□ -2.15
CDK7P50613 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
CDK7P50613 NDUFA4P2-201ENST00000489989 244 ntBASIC1.63□□□□□ -2.15
CDK7P50613 RNU6-947P-201ENST00000516264 106 ntBASIC1.63□□□□□ -2.15
CDK7P50613 AC100767.1-201ENST00000528178 123 ntBASIC1.63□□□□□ -2.15
CDK7P50613 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
CDK7P50613 Pinc.1-201ENST00000616452 154 ntBASIC1.63□□□□□ -2.15
CDK7P50613 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDK7P50613 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDK7P50613 Y_RNA.199-201ENST00000364014 102 ntBASIC1.62□□□□□ -2.15
CDK7P50613 Y_RNA.229-201ENST00000364347 113 ntBASIC1.62□□□□□ -2.15
CDK7P50613 SNORD114-22-201ENST00000365423 72 ntBASIC1.62□□□□□ -2.15
CDK7P50613 RNU4-17P-201ENST00000365598 141 ntBASIC1.62□□□□□ -2.15
CDK7P50613 SNORD38C-201ENST00000384381 69 ntBASIC1.62□□□□□ -2.15
CDK7P50613 Y_RNA.515-201ENST00000384535 112 ntBASIC1.62□□□□□ -2.15
CDK7P50613 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
CDK7P50613 AL451046.2-201ENST00000403074 277 ntBASIC1.62□□□□□ -2.15
CDK7P50613 SNORD11-201ENST00000459124 84 ntBASIC1.62□□□□□ -2.15
CDK7P50613 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
CDK7P50613 RNU7-149P-201ENST00000516739 59 ntBASIC1.62□□□□□ -2.15
CDK7P50613 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.62□□□□□ -2.15
CDK7P50613 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
CDK7P50613 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDK7P50613 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
CDK7P50613 Y_RNA.242-201ENST00000364473 110 ntBASIC1.61□□□□□ -2.15
CDK7P50613 Y_RNA.336-201ENST00000365307 109 ntBASIC1.61□□□□□ -2.15
CDK7P50613 MT-TT-201ENST00000387460 66 ntBASIC1.61□□□□□ -2.15
CDK7P50613 SNORD72-201ENST00000390994 80 ntBASIC1.61□□□□□ -2.15
CDK7P50613 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
CDK7P50613 RNU6-388P-201ENST00000517012 105 ntBASIC1.61□□□□□ -2.15
CDK7P50613 RNU6-389P-201ENST00000517048 105 ntBASIC1.61□□□□□ -2.15
CDK7P50613 AC008507.4-201ENST00000585464 127 ntBASIC1.61□□□□□ -2.15
CDK7P50613 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDK7P50613 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDK7P50613 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDK7P50613 MIR136-201ENST00000385207 82 ntBASIC1.6□□□□□ -2.15
CDK7P50613 Y_RNA.622-201ENST00000411091 108 ntBASIC1.6□□□□□ -2.15
CDK7P50613 Y_RNA.626-201ENST00000411288 95 ntBASIC1.6□□□□□ -2.15
CDK7P50613 AC015922.2-201ENST00000435593 184 ntBASIC1.6□□□□□ -2.15
CDK7P50613 MIR5688-201ENST00000580619 83 ntBASIC1.6□□□□□ -2.15
CDK7P50613 RMST_2.1-201ENST00000617263 136 ntBASIC1.6□□□□□ -2.15
CDK7P50613 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
CDK7P50613 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CDK7P50613 U8.1-201ENST00000362843 134 ntBASIC1.59□□□□□ -2.15
CDK7P50613 RNU6-379P-201ENST00000363813 104 ntBASIC1.59□□□□□ -2.15
CDK7P50613 RNY4P28-201ENST00000365281 93 ntBASIC1.59□□□□□ -2.15
CDK7P50613 SNORA2.2-201ENST00000365473 135 ntBASIC1.59□□□□□ -2.15
CDK7P50613 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
CDK7P50613 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.59□□□□□ -2.15
CDK7P50613 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.59□□□□□ -2.15
CDK7P50613 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.59□□□□□ -2.15
CDK7P50613 RNU6-453P-201ENST00000516819 85 ntBASIC1.59□□□□□ -2.15
CDK7P50613 AC015726.2-201ENST00000620112 122 ntBASIC1.59□□□□□ -2.15
CDK7P50613 AL121890.5-201ENST00000620848 304 ntBASIC1.59□□□□□ -2.15
CDK7P50613 AC078938.1-201ENST00000620993 318 ntBASIC1.59□□□□□ -2.15
CDK7P50613 MIR96-201ENST00000362288 78 ntBASIC1.58□□□□□ -2.16
CDK7P50613 Y_RNA.83-201ENST00000363005 113 ntBASIC1.58□□□□□ -2.16
CDK7P50613 Y_RNA.200-201ENST00000364018 102 ntBASIC1.58□□□□□ -2.16
CDK7P50613 RNU6-42P-201ENST00000384165 107 ntBASIC1.58□□□□□ -2.16
CDK7P50613 Y_RNA.552-201ENST00000384665 112 ntBASIC1.58□□□□□ -2.16
CDK7P50613 AL606845.1-201ENST00000404881 255 ntBASIC1.58□□□□□ -2.16
CDK7P50613 RNU6-917P-201ENST00000516294 104 ntBASIC1.58□□□□□ -2.16
CDK7P50613 SNORA18.7-201ENST00000516910 131 ntBASIC1.58□□□□□ -2.16
CDK7P50613 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms