Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR515-2-201ENST00000384883 83 ntBASIC2.43□□□□□ -2.02
MRE11P49959 MIR515-1-201ENST00000384884 83 ntBASIC2.43□□□□□ -2.02
MRE11P49959 CST2P1-201ENST00000425770 87 ntBASIC2.43□□□□□ -2.02
MRE11P49959 SNRPGP10-201ENST00000432323 225 ntBASIC2.43□□□□□ -2.02
MRE11P49959 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.43□□□□□ -2.02
MRE11P49959 AL358944.1-201ENST00000528537 144 ntBASIC2.43□□□□□ -2.02
MRE11P49959 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.43□□□□□ -2.02
MRE11P49959 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.43□□□□□ -2.02
MRE11P49959 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.43□□□□□ -2.02
MRE11P49959 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MRE11P49959 RNU6-1164P-201ENST00000364428 107 ntBASIC2.42□□□□□ -2.02
MRE11P49959 RNA5SP323-201ENST00000391094 133 ntBASIC2.42□□□□□ -2.02
MRE11P49959 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.42□□□□□ -2.02
MRE11P49959 MRPS17P9-201ENST00000511924 393 ntBASIC2.42□□□□□ -2.02
MRE11P49959 RNU7-193P-201ENST00000516723 65 ntBASIC2.42□□□□□ -2.02
MRE11P49959 RNA5SP137-201ENST00000516833 135 ntBASIC2.42□□□□□ -2.02
MRE11P49959 AC024995.1-201ENST00000523014 93 ntBASIC2.42□□□□□ -2.02
MRE11P49959 MIR3169-201ENST00000578032 83 ntBASIC2.42□□□□□ -2.02
MRE11P49959 MIR6845-201ENST00000613182 61 ntBASIC2.42□□□□□ -2.02
MRE11P49959 AC095038.3-201ENST00000634439 195 ntBASIC2.42□□□□□ -2.02
MRE11P49959 RNU6-862P-201ENST00000362804 105 ntBASIC2.41□□□□□ -2.02
MRE11P49959 Y_RNA.66-201ENST00000362862 102 ntBASIC2.41□□□□□ -2.02
MRE11P49959 SNORA12.1-201ENST00000390873 148 ntBASIC2.41□□□□□ -2.02
MRE11P49959 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MRE11P49959 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.41□□□□□ -2.02
MRE11P49959 AL163195.1-201ENST00000496941 348 ntBASIC2.41□□□□□ -2.02
MRE11P49959 RNU6-659P-201ENST00000516454 104 ntBASIC2.41□□□□□ -2.02
MRE11P49959 RNU6-365P-201ENST00000517113 106 ntBASIC2.41□□□□□ -2.02
MRE11P49959 AL359881.1-201ENST00000602916 267 ntBASIC2.41□□□□□ -2.02
MRE11P49959 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
MRE11P49959 SNORA1B-201ENST00000362535 133 ntBASIC2.4□□□□□ -2.03
MRE11P49959 U8.1-201ENST00000362843 134 ntBASIC2.4□□□□□ -2.03
MRE11P49959 Y_RNA.273-201ENST00000364703 102 ntBASIC2.4□□□□□ -2.03
MRE11P49959 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
MRE11P49959 SNORD72-201ENST00000390994 80 ntBASIC2.4□□□□□ -2.03
MRE11P49959 RNA5SP489-201ENST00000410986 109 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AC099677.2-201ENST00000436385 175 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.4□□□□□ -2.03
MRE11P49959 Y_RNA.686-201ENST00000516548 134 ntBASIC2.4□□□□□ -2.03
MRE11P49959 MIR514B-201ENST00000516774 80 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AC007751.1-201ENST00000529260 376 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AC131055.1-201ENST00000584626 316 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AC008507.4-201ENST00000585464 127 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AL591926.4-201ENST00000616895 298 ntBASIC2.4□□□□□ -2.03
MRE11P49959 MIR6734-201ENST00000621166 68 ntBASIC2.4□□□□□ -2.03
MRE11P49959 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.03
MRE11P49959 MIR126-201ENST00000362291 85 ntBASIC2.39□□□□□ -2.03
MRE11P49959 RNU6-23P-201ENST00000363283 107 ntBASIC2.39□□□□□ -2.03
MRE11P49959 Y_RNA.120-201ENST00000363304 110 ntBASIC2.39□□□□□ -2.03
MRE11P49959 Y_RNA.294-201ENST00000364916 102 ntBASIC2.39□□□□□ -2.03
MRE11P49959 RNU7-94P-201ENST00000459576 63 ntBASIC2.39□□□□□ -2.03
MRE11P49959 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
MRE11P49959 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
MRE11P49959 AC026271.5-201ENST00000577873 130 ntBASIC2.39□□□□□ -2.03
MRE11P49959 AL365205.2-201ENST00000594586 68 ntBASIC2.39□□□□□ -2.03
MRE11P49959 AL078603.1-201ENST00000603824 313 ntBASIC2.39□□□□□ -2.03
MRE11P49959 AC022202.1-201ENST00000613515 211 ntBASIC2.39□□□□□ -2.03
MRE11P49959 RMST_2.1-201ENST00000617263 136 ntBASIC2.39□□□□□ -2.03
MRE11P49959 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.39□□□□□ -2.03
MRE11P49959 AC022513.1-201ENST00000624512 117 ntBASIC2.39□□□□□ -2.03
MRE11P49959 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
MRE11P49959 Y_RNA.81-201ENST00000362997 102 ntBASIC2.38□□□□□ -2.03
MRE11P49959 Y_RNA.353-201ENST00000365440 108 ntBASIC2.38□□□□□ -2.03
MRE11P49959 RNU7-107P-201ENST00000459121 61 ntBASIC2.38□□□□□ -2.03
MRE11P49959 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
MRE11P49959 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
MRE11P49959 RNU6-504P-201ENST00000516568 104 ntBASIC2.38□□□□□ -2.03
MRE11P49959 AC012493.3-201ENST00000604494 112 ntBASIC2.38□□□□□ -2.03
MRE11P49959 MIR6504-201ENST00000613520 61 ntBASIC2.38□□□□□ -2.03
MRE11P49959 MIR219B-201ENST00000637023 88 ntBASIC2.38□□□□□ -2.03
MRE11P49959 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MRE11P49959 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
MRE11P49959 SNORA67.3-201ENST00000384366 140 ntBASIC2.37□□□□□ -2.03
MRE11P49959 SNORD20-201ENST00000384550 80 ntBASIC2.37□□□□□ -2.03
MRE11P49959 MIR522-201ENST00000385071 87 ntBASIC2.37□□□□□ -2.03
MRE11P49959 RNA5SP220-201ENST00000516298 104 ntBASIC2.37□□□□□ -2.03
MRE11P49959 Y_RNA.692-201ENST00000516627 105 ntBASIC2.37□□□□□ -2.03
MRE11P49959 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
MRE11P49959 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
MRE11P49959 RNU2-60P-201ENST00000517290 128 ntBASIC2.37□□□□□ -2.03
MRE11P49959 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.37□□□□□ -2.03
MRE11P49959 Y_RNA.757-201ENST00000578934 114 ntBASIC2.37□□□□□ -2.03
MRE11P49959 AC087685.1-201ENST00000587507 141 ntBASIC2.37□□□□□ -2.03
MRE11P49959 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
MRE11P49959 RNU6-215P-201ENST00000365169 102 ntBASIC2.36□□□□□ -2.03
MRE11P49959 SNORA1-201ENST00000384107 130 ntBASIC2.36□□□□□ -2.03
MRE11P49959 SNORD61-201ENST00000384252 73 ntBASIC2.36□□□□□ -2.03
MRE11P49959 Y_RNA.525-201ENST00000384570 113 ntBASIC2.36□□□□□ -2.03
MRE11P49959 Y_RNA.563-201ENST00000384707 108 ntBASIC2.36□□□□□ -2.03
MRE11P49959 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
MRE11P49959 MIR624-201ENST00000385217 97 ntBASIC2.36□□□□□ -2.03
MRE11P49959 MIR1276-201ENST00000408707 83 ntBASIC2.36□□□□□ -2.03
MRE11P49959 RNA5SP127-201ENST00000411051 133 ntBASIC2.36□□□□□ -2.03
MRE11P49959 MLLT10P1-201ENST00000418346 262 ntBASIC2.36□□□□□ -2.03
MRE11P49959 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.36□□□□□ -2.03
MRE11P49959 FTH1P12-201ENST00000432137 551 ntBASIC2.36□□□□□ -2.03
MRE11P49959 RN7SKP179-201ENST00000516126 217 ntBASIC2.36□□□□□ -2.03
MRE11P49959 SNORA18.4-201ENST00000516440 124 ntBASIC2.36□□□□□ -2.03
MRE11P49959 AC090049.2-201ENST00000550377 109 ntBASIC2.36□□□□□ -2.03
MRE11P49959 AC022217.4-201ENST00000604389 163 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms