Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
LIG4P49917 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
LIG4P49917 BTF3P11-201ENST00000426582 477 ntBASIC1.01□□□□□ -2.25
LIG4P49917 AC023449.1-201ENST00000454464 154 ntBASIC1.01□□□□□ -2.25
LIG4P49917 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.01□□□□□ -2.25
LIG4P49917 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
LIG4P49917 MIR5692C2-201ENST00000577959 77 ntBASIC1.01□□□□□ -2.25
LIG4P49917 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
LIG4P49917 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.01□□□□□ -2.25
LIG4P49917 AC006441.5-201ENST00000612680 209 ntBASIC1.01□□□□□ -2.25
LIG4P49917 MIR4251-201ENST00000635819 61 ntBASIC1.01□□□□□ -2.25
LIG4P49917 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
LIG4P49917 Y_RNA.16-201ENST00000362421 102 ntBASIC1□□□□□ -2.25
LIG4P49917 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
LIG4P49917 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
LIG4P49917 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
LIG4P49917 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1□□□□□ -2.25
LIG4P49917 AC068700.1-201ENST00000565862 3754 ntBASIC1□□□□□ -2.25
LIG4P49917 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
LIG4P49917 MIR367-201ENST00000362299 68 ntBASIC0.99□□□□□ -2.25
LIG4P49917 Y_RNA.14-201ENST00000362415 103 ntBASIC0.99□□□□□ -2.25
LIG4P49917 RNU6-639P-201ENST00000384074 107 ntBASIC0.99□□□□□ -2.25
LIG4P49917 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
LIG4P49917 RNU6-985P-201ENST00000410182 104 ntBASIC0.99□□□□□ -2.25
LIG4P49917 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.99□□□□□ -2.25
LIG4P49917 AL731563.1-201ENST00000442202 214 ntBASIC0.99□□□□□ -2.25
LIG4P49917 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
LIG4P49917 SNORA27.4-201ENST00000516650 95 ntBASIC0.99□□□□□ -2.25
LIG4P49917 RNU7-181P-201ENST00000517234 74 ntBASIC0.99□□□□□ -2.25
LIG4P49917 AC044792.1-201ENST00000593294 196 ntBASIC0.99□□□□□ -2.25
LIG4P49917 AL021707.8-201ENST00000609428 183 ntBASIC0.99□□□□□ -2.25
LIG4P49917 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
LIG4P49917 AC022140.2-201ENST00000623500 188 ntBASIC0.99□□□□□ -2.25
LIG4P49917 Y_RNA.84-201ENST00000363011 104 ntBASIC0.98□□□□□ -2.25
LIG4P49917 Y_RNA.217-201ENST00000364214 105 ntBASIC0.98□□□□□ -2.25
LIG4P49917 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
LIG4P49917 Y_RNA.293-201ENST00000364908 93 ntBASIC0.98□□□□□ -2.25
LIG4P49917 MIR570-201ENST00000384917 97 ntBASIC0.98□□□□□ -2.25
LIG4P49917 RNA5SP496-201ENST00000391240 109 ntBASIC0.98□□□□□ -2.25
LIG4P49917 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.98□□□□□ -2.25
LIG4P49917 MTND5P22-201ENST00000458380 195 ntBASIC0.98□□□□□ -2.25
LIG4P49917 Y_RNA.641-201ENST00000459414 105 ntBASIC0.98□□□□□ -2.25
LIG4P49917 RNU6-1153P-201ENST00000516760 105 ntBASIC0.98□□□□□ -2.25
LIG4P49917 MIR4724-201ENST00000579485 89 ntBASIC0.98□□□□□ -2.25
LIG4P49917 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
LIG4P49917 uc_338.4-201ENST00000616635 176 ntBASIC0.98□□□□□ -2.25
LIG4P49917 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LIG4P49917 RNU6-1067P-201ENST00000384752 107 ntBASIC0.97□□□□□ -2.25
LIG4P49917 AC005534.2-201ENST00000431047 433 ntBASIC0.97□□□□□ -2.25
LIG4P49917 RNU7-149P-201ENST00000516739 59 ntBASIC0.97□□□□□ -2.25
LIG4P49917 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
LIG4P49917 AC131055.1-201ENST00000584626 316 ntBASIC0.97□□□□□ -2.25
LIG4P49917 AL049861.1-201ENST00000603130 150 ntBASIC0.97□□□□□ -2.25
LIG4P49917 AL008718.3-201ENST00000610217 321 ntBASIC0.97□□□□□ -2.25
LIG4P49917 snoU18.1-201ENST00000629629 71 ntBASIC0.97□□□□□ -2.25
LIG4P49917 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
LIG4P49917 Y_RNA.11-201ENST00000362375 109 ntBASIC0.96□□□□□ -2.26
LIG4P49917 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
LIG4P49917 RNU6-1227P-201ENST00000383981 107 ntBASIC0.96□□□□□ -2.26
LIG4P49917 MIR499A-201ENST00000384903 122 ntBASIC0.96□□□□□ -2.26
LIG4P49917 MIR1302-7-201ENST00000408841 72 ntBASIC0.96□□□□□ -2.26
LIG4P49917 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
LIG4P49917 AL392103.1-201ENST00000447000 198 ntBASIC0.96□□□□□ -2.26
LIG4P49917 SERF1AP1-201ENST00000514575 187 ntBASIC0.96□□□□□ -2.26
LIG4P49917 RNU4-57P-201ENST00000515980 135 ntBASIC0.96□□□□□ -2.26
LIG4P49917 RNU11-2P-201ENST00000516898 142 ntBASIC0.96□□□□□ -2.26
LIG4P49917 AC109810.1-201ENST00000534066 224 ntBASIC0.96□□□□□ -2.26
LIG4P49917 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.96□□□□□ -2.26
LIG4P49917 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.96□□□□□ -2.26
LIG4P49917 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
LIG4P49917 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
LIG4P49917 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
LIG4P49917 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
LIG4P49917 SNORA1.2-201ENST00000365189 134 ntBASIC0.95□□□□□ -2.26
LIG4P49917 Y_RNA.370-201ENST00000365589 108 ntBASIC0.95□□□□□ -2.26
LIG4P49917 SNORA51.10-201ENST00000384418 136 ntBASIC0.95□□□□□ -2.26
LIG4P49917 SCARNA24.2-201ENST00000516968 130 ntBASIC0.95□□□□□ -2.26
LIG4P49917 UBE2WP1-201ENST00000362030 340 ntBASIC0.94□□□□□ -2.26
LIG4P49917 Y_RNA.537-201ENST00000384626 109 ntBASIC0.94□□□□□ -2.26
LIG4P49917 MIR1287-201ENST00000408492 90 ntBASIC0.94□□□□□ -2.26
LIG4P49917 RNU6-1203P-201ENST00000410703 110 ntBASIC0.94□□□□□ -2.26
LIG4P49917 AC113618.1-201ENST00000416747 285 ntBASIC0.94□□□□□ -2.26
LIG4P49917 FABP5P4-201ENST00000437203 171 ntBASIC0.94□□□□□ -2.26
LIG4P49917 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
LIG4P49917 RNU6-1338P-201ENST00000516328 91 ntBASIC0.94□□□□□ -2.26
LIG4P49917 RNU7-25P-201ENST00000516544 62 ntBASIC0.94□□□□□ -2.26
LIG4P49917 RNU6-570P-201ENST00000517051 105 ntBASIC0.94□□□□□ -2.26
LIG4P49917 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
LIG4P49917 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
LIG4P49917 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
LIG4P49917 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LIG4P49917 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
LIG4P49917 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
LIG4P49917 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
LIG4P49917 Y_RNA.547-201ENST00000384654 119 ntBASIC0.93□□□□□ -2.26
LIG4P49917 MIR526A2-201ENST00000390198 65 ntBASIC0.93□□□□□ -2.26
LIG4P49917 MIR548O-201ENST00000408583 114 ntBASIC0.93□□□□□ -2.26
LIG4P49917 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
LIG4P49917 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
LIG4P49917 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms