Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
CLK3P49761 AL137067.1-201ENST00000615933 120 ntBASIC2.14□□□□□ -2.07
CLK3P49761 U6.108-201ENST00000637764 58 ntBASIC2.14□□□□□ -2.07
CLK3P49761 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
CLK3P49761 RNA5SP493-201ENST00000364115 91 ntBASIC2.13□□□□□ -2.07
CLK3P49761 RNU6-1107P-201ENST00000364817 104 ntBASIC2.13□□□□□ -2.07
CLK3P49761 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
CLK3P49761 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
CLK3P49761 UBE2DNL-203ENST00000474922 222 ntBASIC2.13□□□□□ -2.07
CLK3P49761 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.13□□□□□ -2.07
CLK3P49761 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
CLK3P49761 MIR5582-201ENST00000579697 68 ntBASIC2.13□□□□□ -2.07
CLK3P49761 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
CLK3P49761 MIR5197-201ENST00000583721 112 ntBASIC2.13□□□□□ -2.07
CLK3P49761 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
CLK3P49761 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
CLK3P49761 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
CLK3P49761 Y_RNA.85-201ENST00000363014 111 ntBASIC2.12□□□□□ -2.07
CLK3P49761 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
CLK3P49761 Y_RNA.369-201ENST00000365568 117 ntBASIC2.12□□□□□ -2.07
CLK3P49761 Y_RNA.410-201ENST00000383992 113 ntBASIC2.12□□□□□ -2.07
CLK3P49761 MIR515-2-201ENST00000384883 83 ntBASIC2.12□□□□□ -2.07
CLK3P49761 MIR515-1-201ENST00000384884 83 ntBASIC2.12□□□□□ -2.07
CLK3P49761 MIR518F-201ENST00000384973 87 ntBASIC2.12□□□□□ -2.07
CLK3P49761 MIR522-201ENST00000385071 87 ntBASIC2.12□□□□□ -2.07
CLK3P49761 RNA5SP465-201ENST00000391195 109 ntBASIC2.12□□□□□ -2.07
CLK3P49761 RNU6-554P-201ENST00000410466 106 ntBASIC2.12□□□□□ -2.07
CLK3P49761 RNA5SP508-201ENST00000411327 119 ntBASIC2.12□□□□□ -2.07
CLK3P49761 AL049830.1-201ENST00000468034 425 ntBASIC2.12□□□□□ -2.07
CLK3P49761 Y_RNA.677-201ENST00000516401 85 ntBASIC2.12□□□□□ -2.07
CLK3P49761 AP002004.2-201ENST00000531656 154 ntBASIC2.12□□□□□ -2.07
CLK3P49761 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
CLK3P49761 AC106754.2-201ENST00000623006 233 ntBASIC2.12□□□□□ -2.07
CLK3P49761 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLK3P49761 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLK3P49761 RNU4-82P-201ENST00000362443 140 ntBASIC2.11□□□□□ -2.07
CLK3P49761 Y_RNA.366-201ENST00000365540 102 ntBASIC2.11□□□□□ -2.07
CLK3P49761 SNORD12C-201ENST00000386307 89 ntBASIC2.11□□□□□ -2.07
CLK3P49761 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
CLK3P49761 RPS26P48-201ENST00000491713 339 ntBASIC2.11□□□□□ -2.07
CLK3P49761 RNU6-537P-201ENST00000517277 103 ntBASIC2.11□□□□□ -2.07
CLK3P49761 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
CLK3P49761 MIR3169-201ENST00000578032 83 ntBASIC2.11□□□□□ -2.07
CLK3P49761 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
CLK3P49761 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
CLK3P49761 AC134878.1-201ENST00000619901 243 ntBASIC2.11□□□□□ -2.07
CLK3P49761 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLK3P49761 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
CLK3P49761 MIR802-201ENST00000390235 94 ntBASIC2.1□□□□□ -2.07
CLK3P49761 RNA5SP323-201ENST00000391094 133 ntBASIC2.1□□□□□ -2.07
CLK3P49761 AL117342.1-201ENST00000404861 406 ntBASIC2.1□□□□□ -2.07
CLK3P49761 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
CLK3P49761 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
CLK3P49761 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.1□□□□□ -2.07
CLK3P49761 ATP5J2P3-201ENST00000451550 258 ntBASIC2.1□□□□□ -2.07
CLK3P49761 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.1□□□□□ -2.07
CLK3P49761 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
CLK3P49761 MIR4762-201ENST00000585261 75 ntBASIC2.1□□□□□ -2.07
CLK3P49761 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
CLK3P49761 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
CLK3P49761 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
CLK3P49761 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
CLK3P49761 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CLK3P49761 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLK3P49761 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLK3P49761 MIR449A-201ENST00000362113 91 ntBASIC2.09□□□□□ -2.07
CLK3P49761 RNU6-766P-201ENST00000362478 107 ntBASIC2.09□□□□□ -2.07
CLK3P49761 SNORA8-201ENST00000384574 139 ntBASIC2.09□□□□□ -2.07
CLK3P49761 SNORA67.4-201ENST00000384688 142 ntBASIC2.09□□□□□ -2.07
CLK3P49761 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
CLK3P49761 CST2P1-201ENST00000425770 87 ntBASIC2.09□□□□□ -2.07
CLK3P49761 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.07
CLK3P49761 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.07
CLK3P49761 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
CLK3P49761 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
CLK3P49761 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
CLK3P49761 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
CLK3P49761 MIR6873-201ENST00000622788 63 ntBASIC2.09□□□□□ -2.07
CLK3P49761 MIR376A2-201ENST00000636782 80 ntBASIC2.09□□□□□ -2.07
CLK3P49761 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CLK3P49761 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
CLK3P49761 Y_RNA.163-201ENST00000363702 113 ntBASIC2.08□□□□□ -2.08
CLK3P49761 Y_RNA.198-201ENST00000364013 98 ntBASIC2.08□□□□□ -2.08
CLK3P49761 U8.5-201ENST00000364528 136 ntBASIC2.08□□□□□ -2.08
CLK3P49761 RNU6-442P-201ENST00000383968 104 ntBASIC2.08□□□□□ -2.08
CLK3P49761 MIR1302-5-201ENST00000408164 150 ntBASIC2.08□□□□□ -2.08
CLK3P49761 MIR548O-201ENST00000408583 114 ntBASIC2.08□□□□□ -2.08
CLK3P49761 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
CLK3P49761 AC099677.2-201ENST00000436385 175 ntBASIC2.08□□□□□ -2.08
CLK3P49761 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
CLK3P49761 MIR4513-201ENST00000581077 86 ntBASIC2.08□□□□□ -2.08
CLK3P49761 RNU6-94P-201ENST00000607728 107 ntBASIC2.08□□□□□ -2.08
CLK3P49761 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
CLK3P49761 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLK3P49761 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CLK3P49761 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CLK3P49761 Y_RNA.49-201ENST00000362714 112 ntBASIC2.07□□□□□ -2.08
CLK3P49761 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
CLK3P49761 SNORD14E-201ENST00000364009 85 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms