Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 RNA5SP493-201ENST00000364115 91 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RNU6-1292P-201ENST00000383856 107 ntBASIC1.8□□□□□ -2.12
THBS3P49746 MIR548A1-201ENST00000385041 97 ntBASIC1.8□□□□□ -2.12
THBS3P49746 MTATP6P21-201ENST00000440681 189 ntBASIC1.8□□□□□ -2.12
THBS3P49746 SNRPGP13-201ENST00000442212 177 ntBASIC1.8□□□□□ -2.12
THBS3P49746 AL606517.2-201ENST00000442855 241 ntBASIC1.8□□□□□ -2.12
THBS3P49746 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RNA5SP200-201ENST00000516360 103 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RNU6-1149P-201ENST00000516810 97 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RNU1-40P-201ENST00000516816 164 ntBASIC1.8□□□□□ -2.12
THBS3P49746 RNU1-97P-201ENST00000516872 164 ntBASIC1.8□□□□□ -2.12
THBS3P49746 AP002004.2-201ENST00000531656 154 ntBASIC1.8□□□□□ -2.12
THBS3P49746 MIR1273D-201ENST00000577266 86 ntBASIC1.8□□□□□ -2.12
THBS3P49746 MIR3613-201ENST00000579844 87 ntBASIC1.8□□□□□ -2.12
THBS3P49746 AL121890.5-201ENST00000620848 304 ntBASIC1.8□□□□□ -2.12
THBS3P49746 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.8□□□□□ -2.12
THBS3P49746 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
THBS3P49746 RNU6-1298P-201ENST00000362456 101 ntBASIC1.79□□□□□ -2.12
THBS3P49746 SNORD115-3-201ENST00000363100 82 ntBASIC1.79□□□□□ -2.12
THBS3P49746 RNU6-147P-201ENST00000383983 107 ntBASIC1.79□□□□□ -2.12
THBS3P49746 MIR221-201ENST00000385135 110 ntBASIC1.79□□□□□ -2.12
THBS3P49746 CST2P1-201ENST00000425770 87 ntBASIC1.79□□□□□ -2.12
THBS3P49746 FTH1P12-201ENST00000432137 551 ntBASIC1.79□□□□□ -2.12
THBS3P49746 snoU13.26-201ENST00000459452 105 ntBASIC1.79□□□□□ -2.12
THBS3P49746 SCARNA15-202ENST00000516881 127 ntBASIC1.79□□□□□ -2.12
THBS3P49746 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
THBS3P49746 SNORD14A-201ENST00000606526 91 ntBASIC1.79□□□□□ -2.12
THBS3P49746 AC022513.1-201ENST00000624512 117 ntBASIC1.79□□□□□ -2.12
THBS3P49746 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.79□□□□□ -2.12
THBS3P49746 AP000553.5-201ENST00000641933 54 ntBASIC1.79□□□□□ -2.12
THBS3P49746 MTND5P18-201ENST00000445624 1801 ntBASIC1.79□□□□□ -2.12
THBS3P49746 MIR1263-201ENST00000408324 86 ntBASIC1.78□□□□□ -2.12
THBS3P49746 MIR548O-201ENST00000408583 114 ntBASIC1.78□□□□□ -2.12
THBS3P49746 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
THBS3P49746 Y_RNA.649-201ENST00000459077 103 ntBASIC1.78□□□□□ -2.12
THBS3P49746 RNU7-94P-201ENST00000459576 63 ntBASIC1.78□□□□□ -2.12
THBS3P49746 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
THBS3P49746 Y_RNA.714-201ENST00000517065 90 ntBASIC1.78□□□□□ -2.12
THBS3P49746 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
THBS3P49746 IGKV3-31-201ENST00000523109 329 ntBASIC1.78□□□□□ -2.12
THBS3P49746 AC087685.1-201ENST00000587507 141 ntBASIC1.78□□□□□ -2.12
THBS3P49746 AC022202.1-201ENST00000613515 211 ntBASIC1.78□□□□□ -2.12
THBS3P49746 U4atac.1-201ENST00000618345 95 ntBASIC1.78□□□□□ -2.12
THBS3P49746 MIR6873-201ENST00000622788 63 ntBASIC1.78□□□□□ -2.12
THBS3P49746 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
THBS3P49746 SNORA3A-201ENST00000364113 130 ntBASIC1.77□□□□□ -2.13
THBS3P49746 Y_RNA.346-201ENST00000365385 112 ntBASIC1.77□□□□□ -2.13
THBS3P49746 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
THBS3P49746 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
THBS3P49746 MIR802-201ENST00000390235 94 ntBASIC1.77□□□□□ -2.13
THBS3P49746 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
THBS3P49746 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.77□□□□□ -2.13
THBS3P49746 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.77□□□□□ -2.13
THBS3P49746 CALM2P4-201ENST00000430810 426 ntBASIC1.77□□□□□ -2.13
THBS3P49746 snoU13.15-201ENST00000459407 104 ntBASIC1.77□□□□□ -2.13
THBS3P49746 RNU7-25P-201ENST00000516544 62 ntBASIC1.77□□□□□ -2.13
THBS3P49746 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
THBS3P49746 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.77□□□□□ -2.13
THBS3P49746 ICE2P2-201ENST00000483823 2787 ntBASIC1.77□□□□□ -2.13
THBS3P49746 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
THBS3P49746 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
THBS3P49746 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
THBS3P49746 RNU6-23P-201ENST00000363283 107 ntBASIC1.76□□□□□ -2.13
THBS3P49746 Y_RNA.366-201ENST00000365540 102 ntBASIC1.76□□□□□ -2.13
THBS3P49746 RNU6-880P-201ENST00000384526 107 ntBASIC1.76□□□□□ -2.13
THBS3P49746 Y_RNA.528-201ENST00000384575 108 ntBASIC1.76□□□□□ -2.13
THBS3P49746 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
THBS3P49746 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
THBS3P49746 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
THBS3P49746 SNRPGP14-201ENST00000435400 219 ntBASIC1.76□□□□□ -2.13
THBS3P49746 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.76□□□□□ -2.13
THBS3P49746 RNU6-717P-201ENST00000459076 104 ntBASIC1.76□□□□□ -2.13
THBS3P49746 MIR5197-201ENST00000583721 112 ntBASIC1.76□□□□□ -2.13
THBS3P49746 MIR4762-201ENST00000585261 75 ntBASIC1.76□□□□□ -2.13
THBS3P49746 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.76□□□□□ -2.13
THBS3P49746 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
THBS3P49746 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
THBS3P49746 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
THBS3P49746 RNU6-1084P-201ENST00000362498 107 ntBASIC1.75□□□□□ -2.13
THBS3P49746 SNORD14E-201ENST00000364009 85 ntBASIC1.75□□□□□ -2.13
THBS3P49746 RNU6-268P-201ENST00000364174 107 ntBASIC1.75□□□□□ -2.13
THBS3P49746 Y_RNA.242-201ENST00000364473 110 ntBASIC1.75□□□□□ -2.13
THBS3P49746 U8.5-201ENST00000364528 136 ntBASIC1.75□□□□□ -2.13
THBS3P49746 RNU6-442P-201ENST00000383968 104 ntBASIC1.75□□□□□ -2.13
THBS3P49746 AL356379.1-201ENST00000414105 126 ntBASIC1.75□□□□□ -2.13
THBS3P49746 AC025033.1-201ENST00000463883 194 ntBASIC1.75□□□□□ -2.13
THBS3P49746 SCARNA16.3-201ENST00000516595 184 ntBASIC1.75□□□□□ -2.13
THBS3P49746 MIR4448-201ENST00000584360 86 ntBASIC1.75□□□□□ -2.13
THBS3P49746 AC006441.5-201ENST00000612680 209 ntBASIC1.75□□□□□ -2.13
THBS3P49746 AL449363.1-201ENST00000617815 186 ntBASIC1.75□□□□□ -2.13
THBS3P49746 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
THBS3P49746 snoU2-30.1-201ENST00000365012 70 ntBASIC1.74□□□□□ -2.13
THBS3P49746 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
THBS3P49746 Y_RNA.547-201ENST00000384654 119 ntBASIC1.74□□□□□ -2.13
THBS3P49746 MIR504-201ENST00000385065 83 ntBASIC1.74□□□□□ -2.13
THBS3P49746 RNA5SP338-201ENST00000410495 85 ntBASIC1.74□□□□□ -2.13
THBS3P49746 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.74□□□□□ -2.13
THBS3P49746 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
THBS3P49746 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms