Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
PRIM2P49643 Y_RNA.7-201ENST00000362352 102 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNORA1.2-201ENST00000365189 134 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNORD24-201ENST00000383884 75 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 Y_RNA.486-201ENST00000384398 107 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 Y_RNA.515-201ENST00000384535 112 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 Y_RNA.552-201ENST00000384665 112 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNORA79-201ENST00000408376 140 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNRPGP13-201ENST00000442212 177 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNORD123-201ENST00000459473 70 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 SNORA18.7-201ENST00000516910 131 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 MIR4744-201ENST00000581563 82 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 AC141273.2-201ENST00000618989 130 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 AC015726.2-201ENST00000620112 122 ntBASIC1.58□□□□□ -2.16
PRIM2P49643 Y_RNA.83-201ENST00000363005 113 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 RNU6-728P-201ENST00000365375 104 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 MT-TT-201ENST00000387460 66 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 MIR548O-201ENST00000408583 114 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 RNU2-70P-201ENST00000410718 179 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.57□□□□□ -2.16
PRIM2P49643 SCARNA8-201ENST00000515924 131 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 RNU6-504P-201ENST00000516568 104 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 RNU6-453P-201ENST00000516819 85 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRIM2P49643 Z83818.1-201ENST00000603584 150 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
PRIM2P49643 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PRIM2P49643 RNU6-1067P-201ENST00000384752 107 ntBASIC1.56□□□□□ -2.16
PRIM2P49643 MIR520C-201ENST00000385005 87 ntBASIC1.56□□□□□ -2.16
PRIM2P49643 RNU6-165P-201ENST00000517170 99 ntBASIC1.56□□□□□ -2.16
PRIM2P49643 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.56□□□□□ -2.16
PRIM2P49643 RNU6-379P-201ENST00000363813 104 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 RNU6-484P-201ENST00000384016 107 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 U8.17-201ENST00000391292 132 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 RNU6-493P-201ENST00000391321 108 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 CYCSP49-201ENST00000420810 319 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.55□□□□□ -2.16
PRIM2P49643 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
PRIM2P49643 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 AC097639.2-201ENST00000603159 172 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.55□□□□□ -2.16
PRIM2P49643 MIR411-201ENST00000362239 96 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 SNORD45.3-201ENST00000363836 72 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 Y_RNA.238-201ENST00000364441 102 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 Y_RNA.622-201ENST00000411091 108 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.54□□□□□ -2.16
PRIM2P49643 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.54□□□□□ -2.16
PRIM2P49643 SNRPGP8-201ENST00000454064 226 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.54□□□□□ -2.16
PRIM2P49643 Y_RNA.666-201ENST00000516187 112 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 RNY3P16-201ENST00000516338 101 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 RNU7-25P-201ENST00000516544 62 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 MIR4764-201ENST00000580680 88 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 MIR4298-201ENST00000584380 73 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
PRIM2P49643 RNU6-923P-201ENST00000364753 107 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 Y_RNA.634-201ENST00000364811 113 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 Y_RNA.435-201ENST00000384095 112 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 RNU4-70P-201ENST00000384579 139 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 Y_RNA.547-201ENST00000384654 119 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 Y_RNA.571-201ENST00000384753 98 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 RNU4-43P-201ENST00000410628 137 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 RNU6-1054P-201ENST00000411293 104 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
PRIM2P49643 Y_RNA.797-201ENST00000515977 94 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 RNU4-57P-201ENST00000515980 135 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 RNU6-197P-201ENST00000516680 100 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.53□□□□□ -2.16
PRIM2P49643 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRIM2P49643 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
PRIM2P49643 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.53□□□□□ -2.16
PRIM2P49643 RNU6-888P-201ENST00000363010 101 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 RNA5SP48-201ENST00000363969 126 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 RNU6-578P-201ENST00000390980 103 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 AC087499.4-201ENST00000448505 178 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 RNU6-693P-201ENST00000516134 107 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 MIR4308-201ENST00000580634 81 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.52□□□□□ -2.17
PRIM2P49643 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PRIM2P49643 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PRIM2P49643 RNU6-1020P-201ENST00000363684 107 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 SNORD115-28-201ENST00000363931 81 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 Y_RNA.370-201ENST00000365589 108 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 AL121914.1-201ENST00000450188 156 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 AC107297.1-201ENST00000459991 176 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 AL133373.1-201ENST00000497098 94 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 AC109810.1-201ENST00000534066 224 ntBASIC1.51□□□□□ -2.17
PRIM2P49643 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PRIM2P49643 RNU2-4P-201ENST00000606190 192 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms