Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MIR1278-201ENST00000408753 81 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.650-201ENST00000459002 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 RNU6-1132P-201ENST00000459214 107 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.777-201ENST00000516982 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.771-201ENST00000598668 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 BX284668.6-201ENST00000606899 438 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.789-201ENST00000622480 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 AL603910.2-201ENST00000407268 136 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 MIR1298-201ENST00000408783 112 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 RNU6-383P-201ENST00000410864 94 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 RPS27P16-201ENST00000425758 201 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 7SK.10-201ENST00000621414 298 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
TM4SF4P48230 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TM4SF4P48230 U8.1-201ENST00000362843 134 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 MIR520E-201ENST00000384867 87 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.67□□□□□ -2.14
TM4SF4P48230 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.67□□□□□ -2.14
TM4SF4P48230 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 RNU6-126P-201ENST00000516685 103 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 RNA5SP364-201ENST00000516938 78 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 AL512310.8-201ENST00000550183 120 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 AC062037.2-201ENST00000610137 73 ntBASIC1.67□□□□□ -2.14
TM4SF4P48230 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TM4SF4P48230 Y_RNA.193-201ENST00000363979 102 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 Y_RNA.350-201ENST00000365409 98 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 MIR516B2-201ENST00000385190 85 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
TM4SF4P48230 SNORD11-201ENST00000459124 84 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.66□□□□□ -2.14
TM4SF4P48230 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 RNU6-917P-201ENST00000516294 104 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.66□□□□□ -2.14
TM4SF4P48230 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 MIR3149-201ENST00000584629 83 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
TM4SF4P48230 Y_RNA.144-201ENST00000363521 113 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 Y_RNA.277-201ENST00000364754 102 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 Y_RNA.416-201ENST00000384014 113 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 Y_RNA.452-201ENST00000384202 108 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 Y_RNA.478-201ENST00000384358 107 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 MIR568-201ENST00000385036 95 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TM4SF4P48230 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 AC015922.2-201ENST00000435593 184 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 NDUFA4P2-201ENST00000489989 244 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 MIR4662B-201ENST00000579498 81 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 AL049861.1-201ENST00000603130 150 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 AL161722.3-201ENST00000605789 2983 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 uc_338.4-201ENST00000616635 176 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 MIR8065-201ENST00000620577 100 ntBASIC1.65□□□□□ -2.15
TM4SF4P48230 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TM4SF4P48230 Y_RNA.36-201ENST00000362602 112 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 SNORD27-201ENST00000363981 72 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 RNU6-463P-201ENST00000384340 107 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 Y_RNA.668-201ENST00000516233 93 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 MIR3664-201ENST00000579074 99 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.64□□□□□ -2.15
TM4SF4P48230 Y_RNA.24-201ENST00000362508 103 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 Y_RNA.262-201ENST00000364641 102 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 MIR598-201ENST00000384868 97 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 MIR526A1-201ENST00000384897 85 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 SNORD111.1-201ENST00000516421 86 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 AC004817.2-201ENST00000561794 651 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 AL442067.1-201ENST00000613261 223 ntBASIC1.63□□□□□ -2.15
TM4SF4P48230 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 Y_RNA.562-201ENST00000384695 113 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 RPS29P1-201ENST00000465274 159 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 AC090142.3-201ENST00000519012 385 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 AC100767.1-201ENST00000528178 123 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 MIR4503-201ENST00000582187 83 ntBASIC1.62□□□□□ -2.15
TM4SF4P48230 RNU4-10P-201ENST00000364383 140 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 RNU4-17P-201ENST00000365598 141 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 snosnR66.1-201ENST00000391095 99 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 Y_RNA.587-201ENST00000391210 103 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 RNU7-149P-201ENST00000516739 59 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TM4SF4P48230 MIR6788-201ENST00000618842 66 ntBASIC1.61□□□□□ -2.15
TM4SF4P48230 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TM4SF4P48230 SNORA20.1-201ENST00000364790 130 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 Y_RNA.304-201ENST00000365011 112 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 Y_RNA.477-201ENST00000384352 108 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 MIR626-201ENST00000385032 94 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 SNORA26-201ENST00000391286 122 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 COX6CP14-201ENST00000469580 174 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 SNORA18.7-201ENST00000516910 131 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 CYP3A52P-201ENST00000563326 91 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 MIR4282-201ENST00000583613 67 ntBASIC1.6□□□□□ -2.15
TM4SF4P48230 MIR3660-201ENST00000584845 100 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms