Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 Y_RNA.571-201ENST00000384753 98 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 Y_RNA.572-201ENST00000384757 98 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 AL606845.1-201ENST00000404881 255 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 RN7SKP51-201ENST00000410781 304 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.26□□□□□ -2.21
NKX2-1P43699 RNU6-1116P-201ENST00000517269 99 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 AC090142.3-201ENST00000519012 385 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 MIR4255-201ENST00000579351 72 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 Pinc.1-201ENST00000616452 154 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 AC078938.1-201ENST00000620993 318 ntBASIC1.26□□□□□ -2.21
NKX2-1P43699 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.26□□□□□ -2.21
NKX2-1P43699 RNU6-457P-201ENST00000363999 107 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 RNU1-42P-201ENST00000364033 160 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 MIR136-201ENST00000385207 82 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 RNU6-578P-201ENST00000390980 103 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 SNORD72-201ENST00000390994 80 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 SNORA26.9-201ENST00000391322 122 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 MIR1304-201ENST00000408243 91 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 MIR1289-2-201ENST00000408360 111 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 MLLT10P1-201ENST00000418346 262 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AC108059.2-201ENST00000434626 151 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 Y_RNA.644-201ENST00000459006 113 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 snoU13.15-201ENST00000459407 104 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AC092991.1-201ENST00000477176 376 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 RNU6-1299P-201ENST00000516316 100 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 Y_RNA.674-201ENST00000516362 113 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 RNU6-453P-201ENST00000516819 85 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 MRPS18CP4-201ENST00000535821 231 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.25□□□□□ -2.21
NKX2-1P43699 MIR4778-201ENST00000577635 80 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AL049861.1-201ENST00000603130 150 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AL357312.1-201ENST00000603879 298 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 AC072026.1-201ENST00000605023 201 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 GHRLOS.1-201ENST00000610995 70 ntBASIC1.25□□□□□ -2.21
NKX2-1P43699 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
NKX2-1P43699 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NKX2-1P43699 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU6-888P-201ENST00000363010 101 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 Y_RNA.274-201ENST00000364714 101 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 Y_RNA.308-201ENST00000365043 101 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU6-728P-201ENST00000365375 104 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 SNORD38C-201ENST00000384381 69 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 Y_RNA.486-201ENST00000384398 107 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NKX2-1P43699 MIR1261-201ENST00000408659 82 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU2-64P-201ENST00000411315 191 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 PIGPP3-201ENST00000425307 415 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU7-120P-201ENST00000459334 63 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 AC005840.1-201ENST00000498412 377 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.24□□□□□ -2.21
NKX2-1P43699 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU6-917P-201ENST00000516294 104 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 RNU6-197P-201ENST00000516680 100 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 BX248123.2-201ENST00000606318 124 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 AC108706.1-201ENST00000611053 297 ntBASIC1.24□□□□□ -2.21
NKX2-1P43699 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NKX2-1P43699 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 Y_RNA.23-201ENST00000362496 106 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 Y_RNA.29-201ENST00000362570 113 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 Y_RNA.66-201ENST00000362862 102 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 RNU6-1020P-201ENST00000363684 107 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 Y_RNA.634-201ENST00000364811 113 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 RNU6-275P-201ENST00000364910 107 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 Y_RNA.297-201ENST00000364950 91 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 MIR504-201ENST00000385065 83 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 MT-TT-201ENST00000387460 66 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 AL451046.2-201ENST00000403074 277 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 snoU13.26-201ENST00000459452 105 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 RNU6-138P-201ENST00000515952 107 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 SNORA25.15-201ENST00000516487 89 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 RNU6-504P-201ENST00000516568 104 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 RNU6-365P-201ENST00000517113 106 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
NKX2-1P43699 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
NKX2-1P43699 Y_RNA.233-201ENST00000364407 101 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 Y_RNA.432-201ENST00000384087 111 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 AC087499.4-201ENST00000448505 178 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 AC093850.1-201ENST00000454121 251 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 RNY3P16-201ENST00000516338 101 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 SNORA74.3-201ENST00000517108 154 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 AC109810.1-201ENST00000534066 224 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 U6.106-201ENST00000636360 105 ntBASIC1.22□□□□□ -2.21
NKX2-1P43699 SNORD45.3-201ENST00000363836 72 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 Y_RNA.240-201ENST00000364469 95 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 RNU6-1318P-201ENST00000365389 103 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 RNU4-70P-201ENST00000384579 139 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 SNORD41-201ENST00000386967 70 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 AL627390.1-201ENST00000396055 340 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 RNU6-1054P-201ENST00000411293 104 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX2-1P43699 SNRPGP13-201ENST00000442212 177 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 RNU2-13P-201ENST00000515909 113 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms