Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 RNU6-388P-201ENST00000517012 105 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 RNU6-389P-201ENST00000517048 105 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
MTHFRP42898 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC005357.1-201ENST00000588399 301 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC013791.1-201ENST00000616619 62 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 MIR548AY-201ENST00000617669 107 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 AC078938.1-201ENST00000620993 318 ntBASIC1.37□□□□□ -2.19
MTHFRP42898 RNU6-199P-201ENST00000362954 107 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 Y_RNA.476-201ENST00000384347 108 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 Y_RNA.489-201ENST00000384410 101 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 MTCO2P33-201ENST00000402100 465 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 COX6CP14-201ENST00000469580 174 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.36□□□□□ -2.19
MTHFRP42898 AL442067.1-201ENST00000613261 223 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 AL591926.4-201ENST00000616895 298 ntBASIC1.36□□□□□ -2.19
MTHFRP42898 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
MTHFRP42898 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
MTHFRP42898 RNU6-899P-201ENST00000363947 107 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 Y_RNA.304-201ENST00000365011 112 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 RNY4P28-201ENST00000365281 93 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 SNORA72-201ENST00000384339 132 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
MTHFRP42898 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
MTHFRP42898 RNU6-922P-201ENST00000516753 99 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 AC100767.1-201ENST00000528178 123 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 MIR5692C2-201ENST00000577959 77 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 MIR3671-201ENST00000580455 88 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 AC009779.6-201ENST00000603972 165 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 MIR6515-201ENST00000619843 57 ntBASIC1.35□□□□□ -2.19
MTHFRP42898 Y_RNA.65-201ENST00000362846 100 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 RNU6-653P-201ENST00000363074 106 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 Y_RNA.292-201ENST00000364904 97 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 Y_RNA.590-201ENST00000410140 107 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.34□□□□□ -2.19
MTHFRP42898 RNU4-71P-201ENST00000516258 113 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 RNU7-116P-201ENST00000516940 62 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.34□□□□□ -2.19
MTHFRP42898 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 AC130289.1-201ENST00000577321 73 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 POLR3GP1-201ENST00000594073 261 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 AC141273.2-201ENST00000618989 130 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
MTHFRP42898 MIR520E-201ENST00000384867 87 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MTHFRP42898 SNORA36B-201ENST00000410438 131 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.33□□□□□ -2.2
MTHFRP42898 PIGPP3-201ENST00000425307 415 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.33□□□□□ -2.2
MTHFRP42898 RNU6-917P-201ENST00000516294 104 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 AC120024.3-201ENST00000603167 156 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 AL365265.1-201ENST00000621045 234 ntBASIC1.33□□□□□ -2.2
MTHFRP42898 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
MTHFRP42898 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
MTHFRP42898 RNU6-674P-201ENST00000363831 107 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 RNU4-10P-201ENST00000364383 140 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 Y_RNA.253-201ENST00000364562 112 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 Y_RNA.257-201ENST00000364596 102 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 RNU6-163P-201ENST00000384396 106 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 MIR1278-201ENST00000408753 81 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 Y_RNA.626-201ENST00000411288 95 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 MLLT10P1-201ENST00000418346 262 ntBASIC1.32□□□□□ -2.2
MTHFRP42898 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.32□□□□□ -2.2
MTHFRP42898 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MTHFRP42898 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RNU6-1205P-201ENST00000363625 106 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 Y_RNA.203-201ENST00000364106 102 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 Y_RNA.274-201ENST00000364714 101 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RNU6-1318P-201ENST00000365389 103 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 Y_RNA.354-201ENST00000365448 111 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RNU6-969P-201ENST00000383900 105 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 Y_RNA.572-201ENST00000384757 98 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 MIR891A-201ENST00000401237 79 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 MIR1298-201ENST00000408783 112 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.31□□□□□ -2.2
MTHFRP42898 RNU6-437P-201ENST00000459408 95 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RPL23AP54-201ENST00000495129 419 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.31□□□□□ -2.2
MTHFRP42898 CYCTP-201ENST00000504253 315 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.31□□□□□ -2.2
MTHFRP42898 AC114811.1-201ENST00000507207 168 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RNY3P16-201ENST00000516338 101 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 Y_RNA.679-201ENST00000516416 91 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 RNU6-1223P-201ENST00000517124 104 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 AL021707.8-201ENST00000609428 183 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms