Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RN7SKP19-201ENST00000516016 252 ntBASIC2.52□□□□□ -2.01
CCNFP41002 RNA5SP236-201ENST00000516169 116 ntBASIC2.52□□□□□ -2.01
CCNFP41002 SNORD33.1-201ENST00000516213 88 ntBASIC2.52□□□□□ -2.01
CCNFP41002 RNA5SP168-201ENST00000516642 112 ntBASIC2.52□□□□□ -2.01
CCNFP41002 SNORA18.7-201ENST00000516910 131 ntBASIC2.52□□□□□ -2.01
CCNFP41002 RNU2-19P-201ENST00000517288 84 ntBASIC2.52□□□□□ -2.01
CCNFP41002 SUB1P4-201ENST00000566062 339 ntBASIC2.52□□□□□ -2.01
CCNFP41002 U6.95-201ENST00000636931 70 ntBASIC2.52□□□□□ -2.01
CCNFP41002 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
CCNFP41002 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCNFP41002 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CCNFP41002 MIRLET7C-201ENST00000362160 84 ntBASIC2.51□□□□□ -2.01
CCNFP41002 MIR342-201ENST00000362212 99 ntBASIC2.51□□□□□ -2.01
CCNFP41002 RNU6-834P-201ENST00000362367 110 ntBASIC2.51□□□□□ -2.01
CCNFP41002 SNORA63D-201ENST00000364359 132 ntBASIC2.51□□□□□ -2.01
CCNFP41002 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
CCNFP41002 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNFP41002 RNA5SP437-201ENST00000517249 129 ntBASIC2.51□□□□□ -2.01
CCNFP41002 AP003484.1-201ENST00000530974 250 ntBASIC2.51□□□□□ -2.01
CCNFP41002 AL121890.5-201ENST00000620848 304 ntBASIC2.51□□□□□ -2.01
CCNFP41002 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCNFP41002 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
CCNFP41002 RNU6-1144P-201ENST00000384247 104 ntBASIC2.5□□□□□ -2.01
CCNFP41002 RNU6-429P-201ENST00000384582 108 ntBASIC2.5□□□□□ -2.01
CCNFP41002 AC055731.1-201ENST00000474387 401 ntBASIC2.5□□□□□ -2.01
CCNFP41002 SCARNA15-202ENST00000516881 127 ntBASIC2.5□□□□□ -2.01
CCNFP41002 AC025166.1-201ENST00000612411 163 ntBASIC2.5□□□□□ -2.01
CCNFP41002 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCNFP41002 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCNFP41002 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
CCNFP41002 RNU6-1031P-201ENST00000384773 107 ntBASIC2.49□□□□□ -2.01
CCNFP41002 MIR548A3-201ENST00000385297 97 ntBASIC2.49□□□□□ -2.01
CCNFP41002 Y_RNA.617-201ENST00000410920 90 ntBASIC2.49□□□□□ -2.01
CCNFP41002 SNX2P2-201ENST00000424553 323 ntBASIC2.49□□□□□ -2.01
CCNFP41002 MIR4709-201ENST00000577272 72 ntBASIC2.49□□□□□ -2.01
CCNFP41002 AC027279.3-201ENST00000625055 122 ntBASIC2.49□□□□□ -2.01
CCNFP41002 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCNFP41002 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
CCNFP41002 RNU6-112P-201ENST00000363599 104 ntBASIC2.48□□□□□ -2.01
CCNFP41002 RNU6-424P-201ENST00000384367 105 ntBASIC2.48□□□□□ -2.01
CCNFP41002 MIR27B-201ENST00000385129 97 ntBASIC2.48□□□□□ -2.01
CCNFP41002 MIR516B2-201ENST00000385190 85 ntBASIC2.48□□□□□ -2.01
CCNFP41002 AC015922.2-201ENST00000435593 184 ntBASIC2.48□□□□□ -2.01
CCNFP41002 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
CCNFP41002 AC093850.1-201ENST00000454121 251 ntBASIC2.48□□□□□ -2.01
CCNFP41002 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.48□□□□□ -2.01
CCNFP41002 AL670379.3-201ENST00000605040 251 ntBASIC2.48□□□□□ -2.01
CCNFP41002 Y_RNA.351-201ENST00000365436 96 ntBASIC2.47□□□□□ -2.01
CCNFP41002 Y_RNA.366-201ENST00000365540 102 ntBASIC2.47□□□□□ -2.01
CCNFP41002 RNU6-240P-201ENST00000516098 97 ntBASIC2.47□□□□□ -2.01
CCNFP41002 IGKV1-22-201ENST00000524313 326 ntBASIC2.47□□□□□ -2.01
CCNFP41002 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCNFP41002 U4.3-201ENST00000621047 82 ntBASIC2.47□□□□□ -2.01
CCNFP41002 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.47□□□□□ -2.01
CCNFP41002 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.01
CCNFP41002 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCNFP41002 RNA5SP432-201ENST00000362480 116 ntBASIC2.46□□□□□ -2.02
CCNFP41002 SNORA63.4-201ENST00000362763 126 ntBASIC2.46□□□□□ -2.02
CCNFP41002 Y_RNA.241-201ENST00000364470 117 ntBASIC2.46□□□□□ -2.02
CCNFP41002 RNU1-133P-201ENST00000364867 167 ntBASIC2.46□□□□□ -2.02
CCNFP41002 RNU6-690P-201ENST00000365242 106 ntBASIC2.46□□□□□ -2.02
CCNFP41002 Y_RNA.346-201ENST00000365385 112 ntBASIC2.46□□□□□ -2.02
CCNFP41002 MIR548A1-201ENST00000385041 97 ntBASIC2.46□□□□□ -2.02
CCNFP41002 RNU6-938P-201ENST00000411285 103 ntBASIC2.46□□□□□ -2.02
CCNFP41002 snoU13.27-201ENST00000459278 104 ntBASIC2.46□□□□□ -2.02
CCNFP41002 RNA5SP57-201ENST00000459463 123 ntBASIC2.46□□□□□ -2.02
CCNFP41002 SCARNA16.3-201ENST00000516595 184 ntBASIC2.46□□□□□ -2.02
CCNFP41002 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.46□□□□□ -2.02
CCNFP41002 AL137067.1-201ENST00000615933 120 ntBASIC2.46□□□□□ -2.02
CCNFP41002 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.46□□□□□ -2.02
CCNFP41002 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
CCNFP41002 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
CCNFP41002 RNU6-833P-201ENST00000363486 107 ntBASIC2.45□□□□□ -2.02
CCNFP41002 Y_RNA.440-201ENST00000384120 114 ntBASIC2.45□□□□□ -2.02
CCNFP41002 RNU6-296P-201ENST00000384608 107 ntBASIC2.45□□□□□ -2.02
CCNFP41002 AC087499.4-201ENST00000448505 178 ntBASIC2.45□□□□□ -2.02
CCNFP41002 AC108938.1-201ENST00000451204 136 ntBASIC2.45□□□□□ -2.02
CCNFP41002 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
CCNFP41002 MIR4778-201ENST00000577635 80 ntBASIC2.45□□□□□ -2.02
CCNFP41002 AC021506.2-201ENST00000612354 169 ntBASIC2.45□□□□□ -2.02
CCNFP41002 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.45□□□□□ -2.02
CCNFP41002 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.45□□□□□ -2.02
CCNFP41002 AL596211.1-201ENST00000569873 2277 ntBASIC2.45□□□□□ -2.02
CCNFP41002 MTND5P18-201ENST00000445624 1801 ntBASIC2.45□□□□□ -2.02
CCNFP41002 AC131280.1-202ENST00000624067 4211 ntBASIC2.44□□□□□ -2.02
CCNFP41002 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
CCNFP41002 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
CCNFP41002 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
CCNFP41002 Y_RNA.528-201ENST00000384575 108 ntBASIC2.44□□□□□ -2.02
CCNFP41002 Y_RNA.649-201ENST00000459077 103 ntBASIC2.44□□□□□ -2.02
CCNFP41002 RNU6-113P-201ENST00000516653 101 ntBASIC2.44□□□□□ -2.02
CCNFP41002 RNA5SP481-201ENST00000516814 122 ntBASIC2.44□□□□□ -2.02
CCNFP41002 RNU7-181P-201ENST00000517234 74 ntBASIC2.44□□□□□ -2.02
CCNFP41002 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
CCNFP41002 MIR6817-201ENST00000615588 66 ntBASIC2.44□□□□□ -2.02
CCNFP41002 MIR203B-201ENST00000636080 86 ntBASIC2.44□□□□□ -2.02
CCNFP41002 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
CCNFP41002 AC008555.8-201ENST00000623602 2168 ntBASIC2.43□□□□□ -2.02
CCNFP41002 AC016717.2-201ENST00000609089 5141 ntBASIC2.43□□□□□ -2.02
CCNFP41002 SNORA22-201ENST00000383907 134 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms