Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC024067.1-201ENST00000426199 223 ntBASIC0.06□□□□□ -2.4
COL18A1P39060 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.06□□□□□ -2.4
COL18A1P39060 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.06□□□□□ -2.4
COL18A1P39060 MIR4771-2-201ENST00000577758 74 ntBASIC0.06□□□□□ -2.4
COL18A1P39060 MIR4771-1-201ENST00000582617 74 ntBASIC0.06□□□□□ -2.4
COL18A1P39060 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.06□□□□□ -2.4
COL18A1P39060 AC022441.3-201ENST00000605737 136 ntBASIC0.06□□□□□ -2.4
COL18A1P39060 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 Y_RNA.203-201ENST00000364106 102 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 Y_RNA.329-201ENST00000365209 107 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 Y_RNA.339-201ENST00000365325 102 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 RNU6-926P-201ENST00000384075 107 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 RNU6-125P-201ENST00000384505 107 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 RNU6-855P-201ENST00000410395 104 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 MTND3P8-201ENST00000412909 339 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.05□□□□□ -2.4
COL18A1P39060 SNRPGP14-201ENST00000435400 219 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 RNU7-181P-201ENST00000517234 74 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 AL355297.3-201ENST00000604082 446 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 AP003357.1-201ENST00000604497 148 ntBASIC0.05□□□□□ -2.4
COL18A1P39060 Y_RNA.450-201ENST00000384198 113 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-364P-201ENST00000384387 107 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 Y_RNA.551-201ENST00000384661 102 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1319P-201ENST00000390855 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-747P-201ENST00000390928 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-241P-201ENST00000391148 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR938-201ENST00000401216 83 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-447P-201ENST00000410293 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1118P-201ENST00000410382 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1076P-201ENST00000410397 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-355P-201ENST00000410427 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-791P-201ENST00000410467 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-705P-201ENST00000410601 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1100P-201ENST00000410691 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-860P-201ENST00000410860 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1217P-201ENST00000411276 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-785P-201ENST00000411324 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MCFD2P1-201ENST00000417812 300 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR18B-201ENST00000454574 71 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 snoU13.16-201ENST00000459350 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR4676-201ENST00000583078 72 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 AC006441.5-201ENST00000612680 209 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 U6.90-201ENST00000614007 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 U6.70-201ENST00000620287 104 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-1099P-201ENST00000363533 107 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 Y_RNA.310-201ENST00000365063 113 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 SNORD38B-201ENST00000384690 67 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR214-201ENST00000385214 110 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR601-201ENST00000385256 79 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU6-205P-201ENST00000390858 107 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 NDUFA4P2-201ENST00000489989 244 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 AC093534.1-201ENST00000504977 132 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNU2-13P-201ENST00000515909 113 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 RNY1P9-201ENST00000532431 109 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 AC060780.3-201ENST00000589464 80 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 U4.5-201ENST00000617137 123 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 SNORD38B-202ENST00000625943 69 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
COL18A1P39060 SNORD45.3-201ENST00000363836 72 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 SNORA63C-201ENST00000364578 129 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 RNA5SP517-201ENST00000364724 117 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 SNORD49B-201ENST00000365172 72 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 RNA5SP117-201ENST00000365294 118 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 SNORD116-2-201ENST00000384274 95 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 RNU6-1184P-201ENST00000384588 108 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 SNORD116-6-201ENST00000384711 96 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 MIR548F5-201ENST00000408421 86 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 SNORD100-201ENST00000408573 76 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 Y_RNA.592-201ENST00000410274 109 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.03□□□□□ -2.4
COL18A1P39060 AC090897.1-201ENST00000580909 226 ntBASIC0.03□□□□□ -2.4
COL18A1P39060 Y_RNA.146-201ENST00000363549 102 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 RNU6-1209P-201ENST00000363655 107 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 U8.7-201ENST00000364940 136 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 SNORD78.2-201ENST00000391076 69 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 Y_RNA.605-201ENST00000410577 105 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.02□□□□□ -2.41
COL18A1P39060 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.02□□□□□ -2.41
COL18A1P39060 RNU7-115P-201ENST00000516433 55 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 RNU6-911P-201ENST00000516523 104 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.02□□□□□ -2.41
COL18A1P39060 AC078938.1-201ENST00000620993 318 ntBASIC0.02□□□□□ -2.41
COL18A1P39060 Y_RNA.72-201ENST00000362894 103 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 AC024405.2-202ENST00000532731 184 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 MIR4659A-201ENST00000580269 81 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 AC020891.4-201ENST00000605745 93 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 MIR125B2-201ENST00000385128 89 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 MTND1P2-201ENST00000430604 821 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 AC005042.3-201ENST00000453230 174 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 AC023449.1-201ENST00000454464 154 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 RNU7-67P-201ENST00000459003 62 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 Y_RNA.644-201ENST00000459006 113 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 RNU7-4P-201ENST00000516961 62 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.01□□□□□ -2.41
COL18A1P39060 AC008507.4-201ENST00000585464 127 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
COL18A1P39060 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms