Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 Y_RNA.370-201ENST00000365589 108 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORA70.7-201ENST00000384159 133 ntBASIC3.07□□□□□ -1.92
GPC1P35052 U8.16-201ENST00000391279 133 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORA11.1-201ENST00000408133 129 ntBASIC3.07□□□□□ -1.92
GPC1P35052 Y_RNA.620-201ENST00000411009 88 ntBASIC3.07□□□□□ -1.92
GPC1P35052 MIR1270-201ENST00000459320 83 ntBASIC3.07□□□□□ -1.92
GPC1P35052 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
GPC1P35052 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
GPC1P35052 RNU7-12P-201ENST00000516030 62 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORA31.10-201ENST00000516482 106 ntBASIC3.07□□□□□ -1.92
GPC1P35052 MIR376B-201ENST00000614515 100 ntBASIC3.07□□□□□ -1.92
GPC1P35052 AC073476.4-201ENST00000628409 72 ntBASIC3.07□□□□□ -1.92
GPC1P35052 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC1P35052 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC1P35052 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC1P35052 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
GPC1P35052 SNORD116-10-201ENST00000363791 102 ntBASIC3.06□□□□□ -1.92
GPC1P35052 Y_RNA.191-201ENST00000363972 113 ntBASIC3.06□□□□□ -1.92
GPC1P35052 MIR490-201ENST00000384865 128 ntBASIC3.06□□□□□ -1.92
GPC1P35052 MIR23A-201ENST00000385245 73 ntBASIC3.06□□□□□ -1.92
GPC1P35052 U8.15-201ENST00000390947 134 ntBASIC3.06□□□□□ -1.92
GPC1P35052 HSPE1P9-201ENST00000440046 311 ntBASIC3.06□□□□□ -1.92
GPC1P35052 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC1P35052 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.06□□□□□ -1.92
GPC1P35052 AC108729.3-201ENST00000513484 108 ntBASIC3.06□□□□□ -1.92
GPC1P35052 RNU7-53P-201ENST00000516705 60 ntBASIC3.06□□□□□ -1.92
GPC1P35052 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
GPC1P35052 MIR4791-201ENST00000607666 84 ntBASIC3.06□□□□□ -1.92
GPC1P35052 RNU6-1313P-201ENST00000362622 102 ntBASIC3.05□□□□□ -1.92
GPC1P35052 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
GPC1P35052 Z96811.1-201ENST00000445880 108 ntBASIC3.05□□□□□ -1.92
GPC1P35052 RN7SL293P-201ENST00000481765 281 ntBASIC3.05□□□□□ -1.92
GPC1P35052 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
GPC1P35052 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.05□□□□□ -1.92
GPC1P35052 AC069114.2-201ENST00000604699 304 ntBASIC3.05□□□□□ -1.92
GPC1P35052 AC022513.1-201ENST00000624512 117 ntBASIC3.05□□□□□ -1.92
GPC1P35052 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GPC1P35052 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GPC1P35052 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GPC1P35052 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GPC1P35052 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
GPC1P35052 Y_RNA.4-201ENST00000362333 112 ntBASIC3.04□□□□□ -1.92
GPC1P35052 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GPC1P35052 SNORD58A-201ENST00000383875 65 ntBASIC3.04□□□□□ -1.92
GPC1P35052 MIR183-201ENST00000384958 110 ntBASIC3.04□□□□□ -1.92
GPC1P35052 AL034345.1-201ENST00000407768 123 ntBASIC3.04□□□□□ -1.92
GPC1P35052 RNU6-1190P-201ENST00000410811 104 ntBASIC3.04□□□□□ -1.92
GPC1P35052 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.04□□□□□ -1.92
GPC1P35052 PRSS3P4-201ENST00000453323 162 ntBASIC3.04□□□□□ -1.92
GPC1P35052 RNA5SP168-201ENST00000516642 112 ntBASIC3.04□□□□□ -1.92
GPC1P35052 MIR4506-201ENST00000584693 77 ntBASIC3.04□□□□□ -1.92
GPC1P35052 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.04□□□□□ -1.92
GPC1P35052 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.04□□□□□ -1.92
GPC1P35052 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.04□□□□□ -1.92
GPC1P35052 U6.105-201ENST00000637379 88 ntBASIC3.04□□□□□ -1.92
GPC1P35052 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.04□□□□□ -1.92
GPC1P35052 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GPC1P35052 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GPC1P35052 RNU6-833P-201ENST00000363486 107 ntBASIC3.03□□□□□ -1.92
GPC1P35052 RNU6-24P-201ENST00000384440 107 ntBASIC3.03□□□□□ -1.92
GPC1P35052 RNA5SP261-201ENST00000410536 106 ntBASIC3.03□□□□□ -1.92
GPC1P35052 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
GPC1P35052 RPS29P29-201ENST00000456396 171 ntBASIC3.03□□□□□ -1.92
GPC1P35052 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.03□□□□□ -1.92
GPC1P35052 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.03□□□□□ -1.92
GPC1P35052 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.03□□□□□ -1.92
GPC1P35052 AL161756.2-201ENST00000604597 246 ntBASIC3.03□□□□□ -1.92
GPC1P35052 AC007179.3-201ENST00000604976 235 ntBASIC3.03□□□□□ -1.92
GPC1P35052 RNU6-86P-201ENST00000606534 107 ntBASIC3.03□□□□□ -1.92
GPC1P35052 MIR6841-201ENST00000637129 72 ntBASIC3.03□□□□□ -1.92
GPC1P35052 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
GPC1P35052 AC007336.1-201ENST00000576365 3828 ntBASIC3.02□□□□□ -1.93
GPC1P35052 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
GPC1P35052 RNU1-33P-201ENST00000364249 162 ntBASIC3.02□□□□□ -1.93
GPC1P35052 RNU6-1019P-201ENST00000364424 107 ntBASIC3.02□□□□□ -1.93
GPC1P35052 RNU6-652P-201ENST00000365488 107 ntBASIC3.02□□□□□ -1.93
GPC1P35052 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.02□□□□□ -1.93
GPC1P35052 DNAJC19P9-201ENST00000555084 351 ntBASIC3.02□□□□□ -1.93
GPC1P35052 MIR5094-201ENST00000578766 85 ntBASIC3.02□□□□□ -1.93
GPC1P35052 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.02□□□□□ -1.93
GPC1P35052 AC103810.7-201ENST00000607821 91 ntBASIC3.02□□□□□ -1.93
GPC1P35052 MIR6717-201ENST00000622747 73 ntBASIC3.02□□□□□ -1.93
GPC1P35052 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
GPC1P35052 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
GPC1P35052 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GPC1P35052 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
GPC1P35052 SNORD56.5-201ENST00000364281 72 ntBASIC3.01□□□□□ -1.93
GPC1P35052 Y_RNA.247-201ENST00000364500 92 ntBASIC3.01□□□□□ -1.93
GPC1P35052 SNORA26.6-201ENST00000391256 115 ntBASIC3.01□□□□□ -1.93
GPC1P35052 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
GPC1P35052 AC090844.1-201ENST00000422019 156 ntBASIC3.01□□□□□ -1.93
GPC1P35052 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
GPC1P35052 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.01□□□□□ -1.93
GPC1P35052 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
GPC1P35052 SCARNA20.6-201ENST00000517251 106 ntBASIC3.01□□□□□ -1.93
GPC1P35052 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.01□□□□□ -1.93
GPC1P35052 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.01□□□□□ -1.93
GPC1P35052 AC026271.5-201ENST00000577873 130 ntBASIC3.01□□□□□ -1.93
GPC1P35052 MIR4439-201ENST00000583746 80 ntBASIC3.01□□□□□ -1.93
GPC1P35052 AC005786.1-201ENST00000588553 154 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 247.4 ms