Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC12P31275 Y_RNA.114-201ENST00000363265 113 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 RNU6-833P-201ENST00000363486 107 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 RNU6-1189P-201ENST00000383958 107 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 AC015922.2-201ENST00000435593 184 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 RNU7-107P-201ENST00000459121 61 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 RNU6-1149P-201ENST00000516810 97 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 AC090049.2-201ENST00000550377 109 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 AL022345.2-201ENST00000606307 135 ntBASIC2.34□□□□□ -2.03
HOXC12P31275 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
HOXC12P31275 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HOXC12P31275 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC12P31275 RNA5SP205-201ENST00000364653 136 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 AL158147.1-201ENST00000443970 75 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 AC093850.1-201ENST00000454121 251 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 SNORA31.17-201ENST00000516953 127 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 MIR376A2-201ENST00000636782 80 ntBASIC2.33□□□□□ -2.04
HOXC12P31275 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC12P31275 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC12P31275 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 SNORA2.2-201ENST00000365473 135 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 Y_RNA.525-201ENST00000384570 113 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 RN7SKP192-201ENST00000411291 327 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC12P31275 AC055731.1-201ENST00000474387 401 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 RNU6-659P-201ENST00000516454 104 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 SNORD36C-201ENST00000516733 66 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC12P31275 MIR5197-201ENST00000583721 112 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXC12P31275 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
HOXC12P31275 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC12P31275 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 RNU6-735P-201ENST00000410612 107 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 RN7SKP179-201ENST00000516126 217 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 SCARNA15-202ENST00000516881 127 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 AP003484.1-201ENST00000530974 250 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 SNORD3E-202ENST00000627253 216 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 AC008555.8-201ENST00000623602 2168 ntBASIC2.31□□□□□ -2.04
HOXC12P31275 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
HOXC12P31275 AC087499.4-201ENST00000448505 178 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 RNA5SP233-201ENST00000459153 113 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 RNA5SP236-201ENST00000516169 116 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 SNORA18.7-201ENST00000516910 131 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 AC133485.4-201ENST00000561835 220 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 AC138907.4-201ENST00000570107 226 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC12P31275 AL513423.1-201ENST00000621695 132 ntBASIC2.3□□□□□ -2.04
HOXC12P31275 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HOXC12P31275 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC12P31275 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC12P31275 RNU6-647P-201ENST00000364243 107 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 MIR516B2-201ENST00000385190 85 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 RNU6-360P-201ENST00000390944 104 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 RNU6-938P-201ENST00000411285 103 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 PGBD4P5-201ENST00000445958 426 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 Y_RNA.651-201ENST00000459380 103 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 AC099513.1-201ENST00000490423 301 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 RNU6-1061P-201ENST00000516530 99 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 MIR4778-201ENST00000577635 80 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
HOXC12P31275 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC12P31275 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
HOXC12P31275 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC12P31275 RNU6-830P-201ENST00000516353 107 ntBASIC2.28□□□□□ -2.04
HOXC12P31275 RNU7-70P-201ENST00000516941 66 ntBASIC2.28□□□□□ -2.04
HOXC12P31275 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
HOXC12P31275 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC12P31275 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC12P31275 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXC12P31275 Y_RNA.280-201ENST00000364765 112 ntBASIC2.27□□□□□ -2.05
HOXC12P31275 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
HOXC12P31275 MIR660-201ENST00000385235 97 ntBASIC2.27□□□□□ -2.05
HOXC12P31275 Y_RNA.629-201ENST00000411368 105 ntBASIC2.27□□□□□ -2.05
HOXC12P31275 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC12P31275 Z98742.3-201ENST00000418637 326 ntBASIC2.27□□□□□ -2.05
HOXC12P31275 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXC12P31275 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC12P31275 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC12P31275 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC12P31275 Y_RNA.241-201ENST00000364470 117 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 Y_RNA.351-201ENST00000365436 96 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 Y_RNA.440-201ENST00000384120 114 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 MIR181B1-201ENST00000385240 110 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC12P31275 RNU6-772P-201ENST00000516042 105 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 RNU7-181P-201ENST00000517234 74 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms