Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL39P39-201ENST00000455840 151 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 MRPS35P2-201ENST00000508242 191 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 Y_RNA.721-201ENST00000517207 102 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 AC005357.1-201ENST00000588399 301 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 AL512605.2-201ENST00000592972 256 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
HOXA9P31269 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HOXA9P31269 Y_RNA.569-201ENST00000384749 103 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 RNU6-763P-201ENST00000390865 106 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 Y_RNA.581-201ENST00000391017 97 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 MTCO2P33-201ENST00000402100 465 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.73□□□□□ -2.29
HOXA9P31269 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 RNU6-437P-201ENST00000459408 95 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 Y_RNA.637-201ENST00000459424 114 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 RNU7-21P-201ENST00000459430 62 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 SNORD123-201ENST00000459473 70 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 Y_RNA.714-201ENST00000517065 90 ntBASIC0.73□□□□□ -2.29
HOXA9P31269 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.73□□□□□ -2.29
HOXA9P31269 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 RNU4-90P-201ENST00000362773 141 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 RNU6-797P-201ENST00000363101 109 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 RNU6-770P-201ENST00000363929 105 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 Y_RNA.380-201ENST00000365663 111 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 Y_RNA.541-201ENST00000384640 113 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 MIR520C-201ENST00000385005 87 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 SNORD12-201ENST00000391002 90 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 AL603910.2-201ENST00000407268 136 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 RPL21P38-201ENST00000418090 167 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 AC063976.4-201ENST00000421971 163 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 MTCYBP6-201ENST00000441810 138 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 HMGN2P32-201ENST00000444648 269 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 SNORD11-201ENST00000459124 84 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 RPL23AP91-201ENST00000569211 455 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 AC113195.1-201ENST00000579952 141 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 MIR4764-201ENST00000580680 88 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 MIR4680-201ENST00000580906 66 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 MIR548AR-201ENST00000582191 57 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.72□□□□□ -2.29
HOXA9P31269 AC007742.2-201ENST00000618226 398 ntBASIC0.72□□□□□ -2.29
HOXA9P31269 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.72□□□□□ -2.29
HOXA9P31269 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HOXA9P31269 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
HOXA9P31269 Y_RNA.64-201ENST00000362845 102 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 Y_RNA.153-201ENST00000363615 91 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 SNORD14E-201ENST00000364009 85 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 RNU6-268P-201ENST00000364174 107 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 SNORD114-24-201ENST00000365029 72 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 Y_RNA.455-201ENST00000384230 98 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 SNORD28B-201ENST00000390993 75 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 SNORD72-201ENST00000390994 80 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 RNU6-1248P-201ENST00000391096 64 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
HOXA9P31269 Y_RNA.701-201ENST00000516812 110 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 AC131281.1-201ENST00000522984 164 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.71□□□□□ -2.3
HOXA9P31269 AC008507.4-201ENST00000585464 127 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 JPX_2.1-201ENST00000614161 69 ntBASIC0.71□□□□□ -2.3
HOXA9P31269 Y_RNA.19-201ENST00000362462 99 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 RNU6-899P-201ENST00000363947 107 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 Y_RNA.210-201ENST00000364161 110 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 RNY1P4-201ENST00000384595 115 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 RNY3P15-201ENST00000516297 97 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 RNU6-1153P-201ENST00000516760 105 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 MIR2681-201ENST00000581814 105 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 AC087685.1-201ENST00000587507 141 ntBASIC0.7□□□□□ -2.3
HOXA9P31269 Y_RNA.16-201ENST00000362421 102 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RNU6-290P-201ENST00000365212 101 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 MIR1302-7-201ENST00000408841 72 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RNU6-383P-201ENST00000410864 94 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RN7SKP164-201ENST00000516138 266 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RNU6-830P-201ENST00000516353 107 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 RNU7-43P-201ENST00000516554 64 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 SNORA40.15-201ENST00000516884 107 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 AL355297.3-201ENST00000604082 446 ntBASIC0.69□□□□□ -2.3
HOXA9P31269 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 Y_RNA.276-201ENST00000364732 109 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 RNU6-442P-201ENST00000383968 104 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 RNU6-662P-201ENST00000384253 104 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 MIR570-201ENST00000384917 97 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.68□□□□□ -2.3
HOXA9P31269 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 RNU2-31P-201ENST00000516954 155 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 AC006441.5-201ENST00000612680 209 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 Pinc.1-201ENST00000616452 154 ntBASIC0.68□□□□□ -2.3
HOXA9P31269 AC013791.1-201ENST00000616619 62 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms