Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNY1P7-201ENST00000384743 110 ntBASIC3.04□□□□□ -1.92
RXRBP28702 MIR583-201ENST00000384846 75 ntBASIC3.04□□□□□ -1.92
RXRBP28702 RNA5SP467-201ENST00000391274 118 ntBASIC3.04□□□□□ -1.92
RXRBP28702 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.04□□□□□ -1.92
RXRBP28702 MIR5009-201ENST00000578736 100 ntBASIC3.04□□□□□ -1.92
RXRBP28702 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.03□□□□□ -1.92
RXRBP28702 snoU2-30.2-201ENST00000362805 70 ntBASIC3.03□□□□□ -1.92
RXRBP28702 RNA5SP325-201ENST00000363756 130 ntBASIC3.03□□□□□ -1.92
RXRBP28702 Y_RNA.544-201ENST00000384650 113 ntBASIC3.03□□□□□ -1.92
RXRBP28702 RNU6-1275P-201ENST00000391087 107 ntBASIC3.03□□□□□ -1.92
RXRBP28702 MIR1253-201ENST00000408273 105 ntBASIC3.03□□□□□ -1.92
RXRBP28702 AC233266.1-201ENST00000454518 96 ntBASIC3.03□□□□□ -1.92
RXRBP28702 AC242852.1-201ENST00000612151 96 ntBASIC3.03□□□□□ -1.92
RXRBP28702 AL442128.1-201ENST00000615151 90 ntBASIC3.03□□□□□ -1.92
RXRBP28702 MIR5739-201ENST00000619803 80 ntBASIC3.03□□□□□ -1.92
RXRBP28702 AC244015.1-201ENST00000622301 99 ntBASIC3.03□□□□□ -1.92
RXRBP28702 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
RXRBP28702 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
RXRBP28702 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
RXRBP28702 MIR522-201ENST00000385071 87 ntBASIC3.02□□□□□ -1.93
RXRBP28702 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
RXRBP28702 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
RXRBP28702 CYP2C59P-201ENST00000457790 269 ntBASIC3.02□□□□□ -1.93
RXRBP28702 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.02□□□□□ -1.93
RXRBP28702 SNORA4.4-201ENST00000515921 135 ntBASIC3.02□□□□□ -1.93
RXRBP28702 RNU6-341P-201ENST00000516973 96 ntBASIC3.02□□□□□ -1.93
RXRBP28702 AL449363.1-201ENST00000617815 186 ntBASIC3.02□□□□□ -1.93
RXRBP28702 MIR6079-201ENST00000635807 62 ntBASIC3.02□□□□□ -1.93
RXRBP28702 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RXRBP28702 AC018630.2-201ENST00000534866 2403 ntBASIC3.02□□□□□ -1.93
RXRBP28702 SNORA33-201ENST00000363664 130 ntBASIC3.01□□□□□ -1.93
RXRBP28702 RNY4P6-201ENST00000363667 96 ntBASIC3.01□□□□□ -1.93
RXRBP28702 RNU6-457P-201ENST00000363999 107 ntBASIC3.01□□□□□ -1.93
RXRBP28702 Y_RNA.344-201ENST00000365381 112 ntBASIC3.01□□□□□ -1.93
RXRBP28702 RNU6-1113P-201ENST00000384348 107 ntBASIC3.01□□□□□ -1.93
RXRBP28702 MIR218-1-201ENST00000384999 110 ntBASIC3.01□□□□□ -1.93
RXRBP28702 MIR221-201ENST00000385135 110 ntBASIC3.01□□□□□ -1.93
RXRBP28702 FTH1P12-201ENST00000432137 551 ntBASIC3.01□□□□□ -1.93
RXRBP28702 SNRPGP14-201ENST00000435400 219 ntBASIC3.01□□□□□ -1.93
RXRBP28702 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
RXRBP28702 RNU6-158P-201ENST00000517104 100 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AC068339.1-201ENST00000526965 141 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AL358944.1-201ENST00000528537 144 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AC004486.1-201ENST00000546846 233 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AC087685.1-201ENST00000587507 141 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AC007229.1-201ENST00000590455 412 ntBASIC3.01□□□□□ -1.93
RXRBP28702 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
RXRBP28702 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
RXRBP28702 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RXRBP28702 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RXRBP28702 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
RXRBP28702 MIR126-201ENST00000362291 85 ntBASIC3□□□□□ -1.93
RXRBP28702 RNA5SP173-201ENST00000364857 136 ntBASIC3□□□□□ -1.93
RXRBP28702 RNU6-1104P-201ENST00000384723 104 ntBASIC3□□□□□ -1.93
RXRBP28702 RNA5SP210-201ENST00000391034 120 ntBASIC3□□□□□ -1.93
RXRBP28702 MTATP8P2-201ENST00000435212 202 ntBASIC3□□□□□ -1.93
RXRBP28702 RNU6-904P-201ENST00000516206 101 ntBASIC3□□□□□ -1.93
RXRBP28702 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3□□□□□ -1.93
RXRBP28702 MIR338-201ENST00000636369 67 ntBASIC3□□□□□ -1.93
RXRBP28702 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RXRBP28702 SNORA1B-201ENST00000362535 133 ntBASIC2.99□□□□□ -1.93
RXRBP28702 Y_RNA.78-201ENST00000362970 110 ntBASIC2.99□□□□□ -1.93
RXRBP28702 SNORD56.5-201ENST00000364281 72 ntBASIC2.99□□□□□ -1.93
RXRBP28702 Y_RNA.267-201ENST00000364679 109 ntBASIC2.99□□□□□ -1.93
RXRBP28702 EDDM3CP-201ENST00000415977 425 ntBASIC2.99□□□□□ -1.93
RXRBP28702 AL445646.1-201ENST00000431784 216 ntBASIC2.99□□□□□ -1.93
RXRBP28702 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
RXRBP28702 RNU6-970P-201ENST00000516312 107 ntBASIC2.99□□□□□ -1.93
RXRBP28702 AP003327.1-201ENST00000529684 127 ntBASIC2.99□□□□□ -1.93
RXRBP28702 AC006441.5-201ENST00000612680 209 ntBASIC2.99□□□□□ -1.93
RXRBP28702 Y_RNA.818-201ENST00000618813 71 ntBASIC2.99□□□□□ -1.93
RXRBP28702 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
RXRBP28702 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RXRBP28702 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RXRBP28702 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
RXRBP28702 Y_RNA.298-201ENST00000364960 107 ntBASIC2.98□□□□□ -1.93
RXRBP28702 Y_RNA.410-201ENST00000383992 113 ntBASIC2.98□□□□□ -1.93
RXRBP28702 MIR548O-201ENST00000408583 114 ntBASIC2.98□□□□□ -1.93
RXRBP28702 RNU6-938P-201ENST00000411285 103 ntBASIC2.98□□□□□ -1.93
RXRBP28702 RNU6-592P-201ENST00000411333 103 ntBASIC2.98□□□□□ -1.93
RXRBP28702 AP1B1P2-201ENST00000416196 106 ntBASIC2.98□□□□□ -1.93
RXRBP28702 RPS15AP28-201ENST00000435088 386 ntBASIC2.98□□□□□ -1.93
RXRBP28702 AL161788.1-201ENST00000441805 169 ntBASIC2.98□□□□□ -1.93
RXRBP28702 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.98□□□□□ -1.93
RXRBP28702 RNU7-25P-201ENST00000516544 62 ntBASIC2.98□□□□□ -1.93
RXRBP28702 MIR3199-1-201ENST00000582434 88 ntBASIC2.98□□□□□ -1.93
RXRBP28702 AC134878.1-201ENST00000619901 243 ntBASIC2.98□□□□□ -1.93
RXRBP28702 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RXRBP28702 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RXRBP28702 ZNF720P1-201ENST00000562403 1939 ntBASIC2.97□□□□□ -1.93
RXRBP28702 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RXRBP28702 RNU6-414P-201ENST00000363705 104 ntBASIC2.97□□□□□ -1.93
RXRBP28702 Y_RNA.213-201ENST00000364178 111 ntBASIC2.97□□□□□ -1.93
RXRBP28702 RNU6-690P-201ENST00000365242 106 ntBASIC2.97□□□□□ -1.93
RXRBP28702 SNORA2.2-201ENST00000365473 135 ntBASIC2.97□□□□□ -1.93
RXRBP28702 FO393413.1-201ENST00000402892 195 ntBASIC2.97□□□□□ -1.93
RXRBP28702 AL353689.1-201ENST00000438895 199 ntBASIC2.97□□□□□ -1.93
RXRBP28702 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.97□□□□□ -1.93
RXRBP28702 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
RXRBP28702 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms