Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNU6-42P-201ENST00000384165 107 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 SNORA72.4-201ENST00000384174 132 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 SNORD63-201ENST00000384262 68 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 MIR802-201ENST00000390235 94 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 RNU6-383P-201ENST00000410864 94 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 RNU7-56P-201ENST00000458744 62 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 AC091959.1-201ENST00000495857 238 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 AC007751.1-201ENST00000529260 376 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DMAP28067 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 MIR6513-201ENST00000621188 64 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 MIR1302-1-201ENST00000637932 143 ntBASIC0.25□□□□□ -2.37
HLA-DMAP28067 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 Y_RNA.187-201ENST00000363918 113 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 MT-TN-201ENST00000387400 73 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 RNU6-847P-201ENST00000411115 108 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 RBMX2P4-201ENST00000441256 376 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 Y_RNA.666-201ENST00000516187 112 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 RNU6-1046P-201ENST00000516538 107 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 MIR4676-201ENST00000583078 72 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 AL512605.2-201ENST00000592972 256 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 AC008608.1-201ENST00000603910 127 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 AL121655.1-201ENST00000605811 308 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 AC133104.2-201ENST00000615272 193 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 uc_338.4-201ENST00000616635 176 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 AC022140.2-201ENST00000623500 188 ntBASIC0.24□□□□□ -2.37
HLA-DMAP28067 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
HLA-DMAP28067 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
HLA-DMAP28067 Y_RNA.418-201ENST00000384029 102 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 RNU6-913P-201ENST00000390913 95 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 RNU6-308P-201ENST00000390957 107 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 AL160004.2-201ENST00000432935 350 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 RNU7-152P-201ENST00000458982 64 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 RNU6-191P-201ENST00000516295 94 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.23□□□□□ -2.37
HLA-DMAP28067 MIR2681-201ENST00000581814 105 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.23□□□□□ -2.37
HLA-DMAP28067 MIR6740-201ENST00000618268 113 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 AL606534.2-204ENST00000635008 178 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 AC099654.14-201ENST00000638599 341 ntBASIC0.23□□□□□ -2.37
HLA-DMAP28067 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 Y_RNA.58-201ENST00000362807 102 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 Y_RNA.154-201ENST00000363624 102 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNY3P1-201ENST00000365085 102 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNY3-201ENST00000365484 102 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 Y_RNA.376-201ENST00000365638 108 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
HLA-DMAP28067 Y_RNA.384-201ENST00000383909 102 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 Y_RNA.439-201ENST00000384119 94 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-102P-201ENST00000384485 104 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-21P-201ENST00000384710 107 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-763P-201ENST00000390865 106 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 MIR1287-201ENST00000408492 90 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-938P-201ENST00000411285 103 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 AC024067.1-201ENST00000426199 223 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 AC236972.2-201ENST00000434979 310 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-1132P-201ENST00000459214 107 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 U8.20-201ENST00000459445 131 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-496P-201ENST00000516145 99 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNU6-958P-201ENST00000516995 106 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RPS29P30-201ENST00000600975 111 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 AP000753.3-201ENST00000604083 169 ntBASIC0.22□□□□□ -2.37
HLA-DMAP28067 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 Y_RNA.303-201ENST00000364998 94 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 Y_RNA.315-201ENST00000365117 102 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 SNORA1.2-201ENST00000365189 134 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNU6-1283P-201ENST00000365314 105 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 SNORA24-201ENST00000384096 131 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 Y_RNA.471-201ENST00000384312 102 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNY1P14-201ENST00000384426 108 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNU6-342P-201ENST00000384521 104 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 MIR548O-201ENST00000408583 114 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 HMGN1P33-201ENST00000432945 451 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 POLR2KP2-201ENST00000438155 177 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNU7-67P-201ENST00000459003 62 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 Y_RNA.637-201ENST00000459424 114 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 SNORD19B-201ENST00000459623 84 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 MRPS35P2-201ENST00000508242 191 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNU6-764P-201ENST00000516396 105 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 RNU7-149P-201ENST00000516739 59 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 MIR4264-201ENST00000583520 66 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DMAP28067 MIR8055-201ENST00000610739 97 ntBASIC0.21□□□□□ -2.38
HLA-DMAP28067 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 Y_RNA.252-201ENST00000364556 101 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 Y_RNA.505-201ENST00000384489 102 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 Y_RNA.529-201ENST00000384586 119 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 MIR216A-201ENST00000385063 110 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.2□□□□□ -2.38
HLA-DMAP28067 RNU7-62P-201ENST00000458856 62 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 RNU6-1170P-201ENST00000515974 106 ntBASIC0.2□□□□□ -2.38
HLA-DMAP28067 SNORA40.14-201ENST00000516543 86 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms