Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNU6-112P-201ENST00000363599 104 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 RNU1-52P-201ENST00000384190 164 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 MIR504-201ENST00000385065 83 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 RNU7-34P-201ENST00000459394 64 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 AC026436.1-201ENST00000510537 270 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 RNA5SP437-201ENST00000517249 129 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 IGKV3-31-201ENST00000523109 329 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 AP003484.1-201ENST00000530974 250 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 MIR1273D-201ENST00000577266 86 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 MIR4529-201ENST00000578110 78 ntBASIC2.95□□□□□ -1.94
ATP2B4P23634 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATP2B4P23634 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATP2B4P23634 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATP2B4P23634 Y_RNA.630-201ENST00000411370 108 ntBASIC2.94□□□□□ -1.94
ATP2B4P23634 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.94□□□□□ -1.94
ATP2B4P23634 RNU7-12P-201ENST00000516030 62 ntBASIC2.94□□□□□ -1.94
ATP2B4P23634 RNU6-781P-201ENST00000516377 101 ntBASIC2.94□□□□□ -1.94
ATP2B4P23634 SNORD36C-201ENST00000516733 66 ntBASIC2.94□□□□□ -1.94
ATP2B4P23634 MIR4709-201ENST00000577272 72 ntBASIC2.94□□□□□ -1.94
ATP2B4P23634 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATP2B4P23634 SNORA3A-201ENST00000364113 130 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 Y_RNA.346-201ENST00000365385 112 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 RNU6-296P-201ENST00000384608 107 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 SNORD33.1-201ENST00000516213 88 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 RNU6-830P-201ENST00000516353 107 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 SNORA31.25-201ENST00000517242 134 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 AC108081.1-201ENST00000604358 221 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 AL670379.3-201ENST00000605040 251 ntBASIC2.93□□□□□ -1.94
ATP2B4P23634 ZNF720P1-201ENST00000562403 1939 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 Y_RNA.440-201ENST00000384120 114 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 RNA5SP450-201ENST00000411206 102 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 RNU6-938P-201ENST00000411285 103 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 AC015922.2-201ENST00000435593 184 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 snoU13.27-201ENST00000459278 104 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 SCARNA16.3-201ENST00000516595 184 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 SNORA18.7-201ENST00000516910 131 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 AC025166.1-201ENST00000612411 163 ntBASIC2.92□□□□□ -1.94
ATP2B4P23634 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATP2B4P23634 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ATP2B4P23634 RNU6-44P-201ENST00000384045 107 ntBASIC2.91□□□□□ -1.94
ATP2B4P23634 MIRLET7F2-201ENST00000385277 83 ntBASIC2.91□□□□□ -1.94
ATP2B4P23634 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.91□□□□□ -1.94
ATP2B4P23634 MIR6129-201ENST00000616087 109 ntBASIC2.91□□□□□ -1.94
ATP2B4P23634 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2B4P23634 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2B4P23634 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ATP2B4P23634 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATP2B4P23634 SNORA25.6-201ENST00000364121 118 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 RNU6-429P-201ENST00000384582 108 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 RPS12P2-201ENST00000439728 269 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.9□□□□□ -1.95
ATP2B4P23634 RNU7-80P-201ENST00000459562 61 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 RPS26P48-201ENST00000491713 339 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.9□□□□□ -1.95
ATP2B4P23634 RNU7-193P-201ENST00000516723 65 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ATP2B4P23634 AL121890.5-201ENST00000620848 304 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 AL513423.1-201ENST00000621695 132 ntBASIC2.9□□□□□ -1.95
ATP2B4P23634 MIR452-201ENST00000385020 85 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 MIR548A3-201ENST00000385297 97 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 AL627390.1-201ENST00000396055 340 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATP2B4P23634 RNU6-237P-201ENST00000515985 71 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.89□□□□□ -1.95
ATP2B4P23634 AC021506.2-201ENST00000612354 169 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 AL137067.1-201ENST00000615933 120 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.89□□□□□ -1.95
ATP2B4P23634 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.89□□□□□ -1.95
ATP2B4P23634 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.89□□□□□ -1.95
ATP2B4P23634 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATP2B4P23634 RNU1-133P-201ENST00000364867 167 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 Y_RNA.454-201ENST00000384224 113 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 MIR1263-201ENST00000408324 86 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 IGKV1-22-201ENST00000524313 326 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 MIR5007-201ENST00000583098 95 ntBASIC2.88□□□□□ -1.95
ATP2B4P23634 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATP2B4P23634 AL442644.1-201ENST00000454390 3105 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 Y_RNA.351-201ENST00000365436 96 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 RNA5SP136-201ENST00000410906 107 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 MIR4524B-201ENST00000581569 115 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 AC078899.2-201ENST00000595282 212 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 AC067747.1-201ENST00000608026 250 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 MIR6733-201ENST00000635723 61 ntBASIC2.87□□□□□ -1.95
ATP2B4P23634 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ATP2B4P23634 Y_RNA.241-201ENST00000364470 117 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 RNU6-690P-201ENST00000365242 106 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 Y_RNA.366-201ENST00000365540 102 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 RNA5SP100-201ENST00000410903 110 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 RNA5SP59-201ENST00000410922 110 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 RNU6-240P-201ENST00000516098 97 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 Y_RNA.709-201ENST00000516952 92 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
ATP2B4P23634 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms