Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNA5SP153-201ENST00000516498 76 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 RNU6-453P-201ENST00000516819 85 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 RNU6-548P-201ENST00000517083 115 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 SNORA1.2-201ENST00000365189 134 ntBASIC1.53□□□□□ -2.16
TNFSF4P23510 SNORD24-201ENST00000383884 75 ntBASIC1.53□□□□□ -2.16
TNFSF4P23510 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
TNFSF4P23510 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF4P23510 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF4P23510 AC104984.5-201ENST00000586878 94 ntBASIC1.53□□□□□ -2.16
TNFSF4P23510 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
TNFSF4P23510 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
TNFSF4P23510 Y_RNA.7-201ENST00000362352 102 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 Y_RNA.121-201ENST00000363309 113 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 Y_RNA.199-201ENST00000364014 102 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 Y_RNA.200-201ENST00000364018 102 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU6-728P-201ENST00000365375 104 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU6-484P-201ENST00000384016 107 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU6-1067P-201ENST00000384752 107 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 U8.17-201ENST00000391292 132 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU2-70P-201ENST00000410718 179 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU6-1054P-201ENST00000411293 104 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 Y_RNA.666-201ENST00000516187 112 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 RNU6-504P-201ENST00000516568 104 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 MIR4764-201ENST00000580680 88 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 MIR4744-201ENST00000581563 82 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 AC009779.6-201ENST00000603972 165 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.52□□□□□ -2.17
TNFSF4P23510 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TNFSF4P23510 Y_RNA.476-201ENST00000384347 108 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 RNU6-493P-201ENST00000391321 108 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 MIR1289-2-201ENST00000408360 111 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 SNORA79-201ENST00000408376 140 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFSF4P23510 RNU4-57P-201ENST00000515980 135 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 SNORA31.4-201ENST00000516049 129 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 RNY3P16-201ENST00000516338 101 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TNFSF4P23510 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 AP000942.4-201ENST00000604811 241 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 MIR6845-201ENST00000613182 61 ntBASIC1.51□□□□□ -2.17
TNFSF4P23510 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.51□□□□□ -2.17
TNFSF4P23510 SNORD45.3-201ENST00000363836 72 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 RNA5SP48-201ENST00000363969 126 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 Y_RNA.622-201ENST00000411091 108 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 SNRPGP8-201ENST00000454064 226 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 AC097639.2-201ENST00000603159 172 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 Z83818.1-201ENST00000603584 150 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 AL096861.1-201ENST00000610899 123 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 MIR6715A-201ENST00000615929 79 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 AC141273.2-201ENST00000618989 130 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 MIR7843-201ENST00000622274 79 ntBASIC1.5□□□□□ -2.17
TNFSF4P23510 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.49□□□□□ -2.17
TNFSF4P23510 Y_RNA.83-201ENST00000363005 113 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 Y_RNA.238-201ENST00000364441 102 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 RNU6-923P-201ENST00000364753 107 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 Y_RNA.634-201ENST00000364811 113 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 Y_RNA.515-201ENST00000384535 112 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF4P23510 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF4P23510 AC245047.7-201ENST00000440265 293 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 AC087499.4-201ENST00000448505 178 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.49□□□□□ -2.17
TNFSF4P23510 MIR548AR-201ENST00000582191 57 ntBASIC1.49□□□□□ -2.17
TNFSF4P23510 MIR411-201ENST00000362239 96 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 RNU6-888P-201ENST00000363010 101 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 SNORD115-28-201ENST00000363931 81 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 Y_RNA.552-201ENST00000384665 112 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 RNU4-43P-201ENST00000410628 137 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 AL133373.1-201ENST00000497098 94 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.48□□□□□ -2.17
TNFSF4P23510 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 RNU6-693P-201ENST00000516134 107 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 RNU6-197P-201ENST00000516680 100 ntBASIC1.48□□□□□ -2.17
TNFSF4P23510 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TNFSF4P23510 Y_RNA.66-201ENST00000362862 102 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 RNU6-379P-201ENST00000363813 104 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 Y_RNA.370-201ENST00000365589 108 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 RNU4-70P-201ENST00000384579 139 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 Y_RNA.571-201ENST00000384753 98 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 RNU6-578P-201ENST00000390980 103 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.47□□□□□ -2.17
TNFSF4P23510 AC108210.2-201ENST00000503681 201 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 Y_RNA.797-201ENST00000515977 94 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 MIR3192-201ENST00000584920 77 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 RNU2-4P-201ENST00000606190 192 ntBASIC1.47□□□□□ -2.17
TNFSF4P23510 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.47□□□□□ -2.17
TNFSF4P23510 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms