Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-23P-201ENST00000363283 107 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-674P-201ENST00000363831 107 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.217-201ENST00000364214 105 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 SNORA63D-201ENST00000364359 132 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 SNORA20.1-201ENST00000364790 130 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-728P-201ENST00000365375 104 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-1264P-201ENST00000383891 107 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.556-201ENST00000384677 113 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.569-201ENST00000384749 103 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 MIR520G-201ENST00000385064 90 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-855P-201ENST00000410395 104 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.641-201ENST00000459414 105 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 AC005908.1-201ENST00000468701 347 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RPS26P55-201ENST00000471178 356 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.679-201ENST00000516416 91 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-63P-201ENST00000516690 95 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 RNU6-341P-201ENST00000516973 96 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 AC100767.1-201ENST00000528178 123 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 AL358944.1-201ENST00000528537 144 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 AC024405.2-202ENST00000532731 184 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.81□□□□□ -2.28
COL5A1P20908 MIR4711-201ENST00000578274 70 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 BX284668.6-201ENST00000606899 438 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 snoU18.1-201ENST00000629629 71 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 SNORA1B-201ENST00000362535 133 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 Y_RNA.117-201ENST00000363294 101 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 Y_RNA.416-201ENST00000384014 113 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6-35P-201ENST00000384530 107 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 MIR194-1-201ENST00000384892 85 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 MIR548H3-201ENST00000408771 118 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 SNORA36B-201ENST00000410438 131 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC009310.1-201ENST00000414414 451 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC245047.4-201ENST00000433189 144 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.8□□□□□ -2.28
COL5A1P20908 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.8□□□□□ -2.28
COL5A1P20908 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.8□□□□□ -2.28
COL5A1P20908 AL442067.1-201ENST00000613261 223 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC073349.3-201ENST00000617616 186 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC134026.1-201ENST00000623249 2239 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COL5A1P20908 MIR411-201ENST00000362239 96 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 SNORA25.1-201ENST00000362326 128 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 SNORD68-201ENST00000363214 84 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6-112P-201ENST00000363599 104 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 U8.7-201ENST00000364940 136 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6-484P-201ENST00000384016 107 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 SNORA72-201ENST00000384339 132 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNA5SP482-201ENST00000391269 118 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.8□□□□□ -2.28
COL5A1P20908 Y_RNA.637-201ENST00000459424 114 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 RNU7-149P-201ENST00000516739 59 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 Y_RNA.714-201ENST00000517065 90 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AP002004.2-201ENST00000531656 154 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 MIR548AY-201ENST00000617669 107 ntBASIC0.8□□□□□ -2.28
COL5A1P20908 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.8□□□□□ -2.28
COL5A1P20908 RNU6-1048P-201ENST00000364054 107 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 RNU6-1323P-201ENST00000384025 107 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 Y_RNA.476-201ENST00000384347 108 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 Y_RNA.477-201ENST00000384352 108 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 MIR873-201ENST00000401120 77 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 RNA5SP100-201ENST00000410903 110 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 RNA5SP59-201ENST00000410922 110 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 RNA5SP501-201ENST00000410990 112 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 U8.19-201ENST00000459095 133 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 AC127455.1-201ENST00000565496 145 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 MIR4762-201ENST00000585261 75 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 U2.14-201ENST00000615943 113 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 U1.36-201ENST00000620684 176 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.79□□□□□ -2.28
COL5A1P20908 MIRLET7C-201ENST00000362160 84 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-653P-201ENST00000363074 106 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 Y_RNA.200-201ENST00000364018 102 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU4-10P-201ENST00000364383 140 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 Y_RNA.257-201ENST00000364596 102 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 Y_RNA.262-201ENST00000364641 102 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 Y_RNA.267-201ENST00000364679 109 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNY4P28-201ENST00000365281 93 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-338P-201ENST00000383888 105 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-442P-201ENST00000383968 104 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-662P-201ENST00000384253 104 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 MIR520A-201ENST00000384862 85 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-383P-201ENST00000410864 94 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU2-55P-201ENST00000411146 174 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 COX6CP10-201ENST00000416832 224 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 SNORD11-201ENST00000459124 84 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RPS26P45-201ENST00000471748 340 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNU6-1007P-201ENST00000516586 107 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 RNA5SP437-201ENST00000517249 129 ntBASIC0.78□□□□□ -2.28
COL5A1P20908 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms