Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 Y_RNA.270-201ENST00000364693 104 ntBASIC1.61□□□□□ -2.15
CD53P19397 Y_RNA.571-201ENST00000384753 98 ntBASIC1.61□□□□□ -2.15
CD53P19397 MT-TT-201ENST00000387460 66 ntBASIC1.61□□□□□ -2.15
CD53P19397 RNU6-918P-201ENST00000391219 106 ntBASIC1.61□□□□□ -2.15
CD53P19397 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
CD53P19397 AL049830.1-201ENST00000468034 425 ntBASIC1.61□□□□□ -2.15
CD53P19397 RNU6-861P-201ENST00000516745 106 ntBASIC1.61□□□□□ -2.15
CD53P19397 RNU6-453P-201ENST00000516819 85 ntBASIC1.61□□□□□ -2.15
CD53P19397 AC019288.1-201ENST00000557918 224 ntBASIC1.61□□□□□ -2.15
CD53P19397 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
CD53P19397 SNORD68-201ENST00000363214 84 ntBASIC1.6□□□□□ -2.15
CD53P19397 Y_RNA.150-201ENST00000363562 102 ntBASIC1.6□□□□□ -2.15
CD53P19397 RNU6-1209P-201ENST00000363655 107 ntBASIC1.6□□□□□ -2.15
CD53P19397 RNU6-674P-201ENST00000363831 107 ntBASIC1.6□□□□□ -2.15
CD53P19397 Y_RNA.233-201ENST00000364407 101 ntBASIC1.6□□□□□ -2.15
CD53P19397 RNU6-381P-201ENST00000391259 108 ntBASIC1.6□□□□□ -2.15
CD53P19397 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
CD53P19397 RNU2-64P-201ENST00000411315 191 ntBASIC1.6□□□□□ -2.15
CD53P19397 SNRPGP10-201ENST00000432323 225 ntBASIC1.6□□□□□ -2.15
CD53P19397 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.6□□□□□ -2.15
CD53P19397 AC023449.1-201ENST00000454464 154 ntBASIC1.6□□□□□ -2.15
CD53P19397 Y_RNA.797-201ENST00000515977 94 ntBASIC1.6□□□□□ -2.15
CD53P19397 RN7SKP164-201ENST00000516138 266 ntBASIC1.6□□□□□ -2.15
CD53P19397 MIR2681-201ENST00000581814 105 ntBASIC1.6□□□□□ -2.15
CD53P19397 AL049861.1-201ENST00000603130 150 ntBASIC1.6□□□□□ -2.15
CD53P19397 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
CD53P19397 AC072026.1-201ENST00000605023 201 ntBASIC1.6□□□□□ -2.15
CD53P19397 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
CD53P19397 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CD53P19397 Y_RNA.253-201ENST00000364562 112 ntBASIC1.59□□□□□ -2.15
CD53P19397 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
CD53P19397 SNORA12.1-201ENST00000390873 148 ntBASIC1.59□□□□□ -2.15
CD53P19397 Y_RNA.587-201ENST00000391210 103 ntBASIC1.59□□□□□ -2.15
CD53P19397 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.59□□□□□ -2.15
CD53P19397 RNU7-120P-201ENST00000459334 63 ntBASIC1.59□□□□□ -2.15
CD53P19397 HMGN1P7-201ENST00000491722 313 ntBASIC1.59□□□□□ -2.15
CD53P19397 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
CD53P19397 SCARNA8-201ENST00000515924 131 ntBASIC1.59□□□□□ -2.15
CD53P19397 RNU6-1219P-201ENST00000516143 112 ntBASIC1.59□□□□□ -2.15
CD53P19397 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
CD53P19397 AL591926.4-201ENST00000616895 298 ntBASIC1.59□□□□□ -2.15
CD53P19397 Y_RNA.796-201ENST00000364268 102 ntBASIC1.58□□□□□ -2.16
CD53P19397 Y_RNA.799-201ENST00000364992 102 ntBASIC1.58□□□□□ -2.16
CD53P19397 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
CD53P19397 AL606845.1-201ENST00000404881 255 ntBASIC1.58□□□□□ -2.16
CD53P19397 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
CD53P19397 AC092991.1-201ENST00000477176 376 ntBASIC1.58□□□□□ -2.16
CD53P19397 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
CD53P19397 MIR5688-201ENST00000580619 83 ntBASIC1.58□□□□□ -2.16
CD53P19397 MIR4744-201ENST00000581563 82 ntBASIC1.58□□□□□ -2.16
CD53P19397 AC098479.1-201ENST00000609225 154 ntBASIC1.58□□□□□ -2.16
CD53P19397 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
CD53P19397 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD53P19397 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD53P19397 RNU6-199P-201ENST00000362954 107 ntBASIC1.57□□□□□ -2.16
CD53P19397 RNY1P10-201ENST00000363268 113 ntBASIC1.57□□□□□ -2.16
CD53P19397 RNU6-103P-201ENST00000363686 107 ntBASIC1.57□□□□□ -2.16
CD53P19397 RNU6-209P-201ENST00000384118 107 ntBASIC1.57□□□□□ -2.16
CD53P19397 MIR616-201ENST00000385293 97 ntBASIC1.57□□□□□ -2.16
CD53P19397 RNA5SP496-201ENST00000391240 109 ntBASIC1.57□□□□□ -2.16
CD53P19397 Y_RNA.622-201ENST00000411091 108 ntBASIC1.57□□□□□ -2.16
CD53P19397 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
CD53P19397 Y_RNA.662-201ENST00000516028 97 ntBASIC1.57□□□□□ -2.16
CD53P19397 AL358944.1-201ENST00000528537 144 ntBASIC1.57□□□□□ -2.16
CD53P19397 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.57□□□□□ -2.16
CD53P19397 AL359821.1-201ENST00000605519 182 ntBASIC1.57□□□□□ -2.16
CD53P19397 AC106754.2-201ENST00000623006 233 ntBASIC1.57□□□□□ -2.16
CD53P19397 U6.106-201ENST00000636360 105 ntBASIC1.57□□□□□ -2.16
CD53P19397 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.57□□□□□ -2.16
CD53P19397 RNU6-682P-201ENST00000363843 106 ntBASIC1.56□□□□□ -2.16
CD53P19397 Y_RNA.412-201ENST00000384001 104 ntBASIC1.56□□□□□ -2.16
CD53P19397 RNU6-424P-201ENST00000384367 105 ntBASIC1.56□□□□□ -2.16
CD53P19397 RNU6-578P-201ENST00000390980 103 ntBASIC1.56□□□□□ -2.16
CD53P19397 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
CD53P19397 RNU6-131P-201ENST00000391144 107 ntBASIC1.56□□□□□ -2.16
CD53P19397 AL121914.1-201ENST00000450188 156 ntBASIC1.56□□□□□ -2.16
CD53P19397 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
CD53P19397 AC074198.2-201ENST00000508153 258 ntBASIC1.56□□□□□ -2.16
CD53P19397 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
CD53P19397 RNU6-322P-201ENST00000516010 103 ntBASIC1.56□□□□□ -2.16
CD53P19397 RNA5SP168-201ENST00000516642 112 ntBASIC1.56□□□□□ -2.16
CD53P19397 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
CD53P19397 MIR8070-201ENST00000616510 88 ntBASIC1.56□□□□□ -2.16
CD53P19397 FTX_2.1-201ENST00000618816 94 ntBASIC1.56□□□□□ -2.16
CD53P19397 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CD53P19397 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
CD53P19397 RNU6-1084P-201ENST00000362498 107 ntBASIC1.55□□□□□ -2.16
CD53P19397 Y_RNA.121-201ENST00000363309 113 ntBASIC1.55□□□□□ -2.16
CD53P19397 MIR802-201ENST00000390235 94 ntBASIC1.55□□□□□ -2.16
CD53P19397 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
CD53P19397 SNORD11-201ENST00000459124 84 ntBASIC1.55□□□□□ -2.16
CD53P19397 Y_RNA.714-201ENST00000517065 90 ntBASIC1.55□□□□□ -2.16
CD53P19397 AC109810.1-201ENST00000534066 224 ntBASIC1.55□□□□□ -2.16
CD53P19397 AC108706.1-201ENST00000611053 297 ntBASIC1.55□□□□□ -2.16
CD53P19397 AL391903.3-201ENST00000612158 163 ntBASIC1.55□□□□□ -2.16
CD53P19397 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.55□□□□□ -2.16
CD53P19397 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
CD53P19397 Y_RNA.435-201ENST00000384095 112 ntBASIC1.54□□□□□ -2.16
CD53P19397 Y_RNA.508-201ENST00000384502 114 ntBASIC1.54□□□□□ -2.16
CD53P19397 RNU6-939P-201ENST00000384634 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms