Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU2-31P-201ENST00000516954 155 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 AP003072.1-201ENST00000531740 145 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 AC008507.4-201ENST00000585464 127 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.95□□□□□ -2.26
PDGFRAP16234 SEPT14P17-201ENST00000617978 177 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 RNU6-1272P-201ENST00000362776 107 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 Y_RNA.116-201ENST00000363292 103 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 Y_RNA.242-201ENST00000364473 110 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 AL731563.1-201ENST00000442202 214 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.94□□□□□ -2.26
PDGFRAP16234 SNORD11-201ENST00000459124 84 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 RN7SKP164-201ENST00000516138 266 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 RPL23AP91-201ENST00000569211 455 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 MIR3973-201ENST00000579824 107 ntBASIC0.94□□□□□ -2.26
PDGFRAP16234 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
PDGFRAP16234 SNORA25.1-201ENST00000362326 128 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 Y_RNA.84-201ENST00000363011 104 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 SNORA25.3-201ENST00000363205 127 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 Y_RNA.152-201ENST00000363578 100 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU6-899P-201ENST00000363947 107 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU6-268P-201ENST00000364174 107 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU6-326P-201ENST00000365480 107 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU6-662P-201ENST00000384253 104 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 MIR802-201ENST00000390235 94 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 SNORA53-201ENST00000391141 249 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU6-1143P-201ENST00000516125 104 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 RNU11-2P-201ENST00000516898 142 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PDGFRAP16234 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 MIR548AR-201ENST00000582191 57 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 Pinc.1-201ENST00000616452 154 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 AC022140.2-201ENST00000623500 188 ntBASIC0.93□□□□□ -2.26
PDGFRAP16234 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 Y_RNA.326-201ENST00000365176 113 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 RNU6-144P-201ENST00000383951 107 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 RNU6-514P-201ENST00000384208 107 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.92□□□□□ -2.26
PDGFRAP16234 AL512605.2-201ENST00000592972 256 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 AC013791.1-201ENST00000616619 62 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 AC008133.2-201ENST00000624540 351 ntBASIC0.92□□□□□ -2.26
PDGFRAP16234 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
PDGFRAP16234 RNU6-1205P-201ENST00000363625 106 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 Y_RNA.217-201ENST00000364214 105 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 Y_RNA.330-201ENST00000365230 109 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 Y_RNA.512-201ENST00000384518 102 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 SNORD72-201ENST00000390994 80 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 AL603910.2-201ENST00000407268 136 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 RNU6-1203P-201ENST00000410703 110 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 BTF3P11-201ENST00000426582 477 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 MTND4LP30-201ENST00000454092 297 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 Y_RNA.641-201ENST00000459414 105 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 RNU6-1338P-201ENST00000516328 91 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 RNU6-570P-201ENST00000517051 105 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 AC037487.3-201ENST00000606668 112 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 AL008718.3-201ENST00000610217 321 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 AC006441.5-201ENST00000612680 209 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
PDGFRAP16234 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
PDGFRAP16234 MIR518E-201ENST00000385252 88 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 SNORD28B-201ENST00000390993 75 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 RNU6-1109P-201ENST00000391187 107 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 RNU6-383P-201ENST00000410864 94 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.9□□□□□ -2.27
PDGFRAP16234 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
PDGFRAP16234 AL392103.1-201ENST00000447000 198 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 MTATP8P1-201ENST00000467115 207 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 SERF1AP1-201ENST00000514575 187 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 SNORA27.4-201ENST00000516650 95 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 SNORA4-201ENST00000584302 138 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 AL021707.8-201ENST00000609428 183 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.9□□□□□ -2.27
PDGFRAP16234 MIR4251-201ENST00000635819 61 ntBASIC0.9□□□□□ -2.27
PDGFRAP16234 Y_RNA.269-201ENST00000364685 89 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 Y_RNA.355-201ENST00000365462 98 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 Y_RNA.370-201ENST00000365589 108 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 RNU6-1067P-201ENST00000384752 107 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 U8.17-201ENST00000391292 132 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 SCARNA24.2-201ENST00000516968 130 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 MIR5692C2-201ENST00000577959 77 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
PDGFRAP16234 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 AP001282.2-201ENST00000616149 309 ntBASIC0.89□□□□□ -2.27
PDGFRAP16234 UBE2WP1-201ENST00000362030 340 ntBASIC0.88□□□□□ -2.27
PDGFRAP16234 RNU6-1160P-201ENST00000384546 104 ntBASIC0.88□□□□□ -2.27
PDGFRAP16234 MIR1302-7-201ENST00000408841 72 ntBASIC0.88□□□□□ -2.27
PDGFRAP16234 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
PDGFRAP16234 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.88□□□□□ -2.27
PDGFRAP16234 Y_RNA.720-201ENST00000517166 92 ntBASIC0.88□□□□□ -2.27
PDGFRAP16234 DEFB108E-201ENST00000524692 240 ntBASIC0.88□□□□□ -2.27
PDGFRAP16234 AC109810.1-201ENST00000534066 224 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms