Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 RNU4-55P-201ENST00000410731 137 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.34□□□□□ -2.46
TPRP12270 RNU7-125P-201ENST00000458760 62 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.34□□□□□ -2.46
TPRP12270 SNORA25.10-201ENST00000515926 124 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-469P-201ENST00000516253 101 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNA5SP461-201ENST00000516451 104 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.34□□□□□ -2.46
TPRP12270 MTND1P24-201ENST00000552175 861 ntBASIC-0.34□□□□□ -2.46
TPRP12270 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.34□□□□□ -2.46
TPRP12270 MIR5704-201ENST00000584029 77 ntBASIC-0.34□□□□□ -2.46
TPRP12270 POLR3GP2-201ENST00000588366 668 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AC092954.2-201ENST00000609103 430 ntBASIC-0.34□□□□□ -2.46
TPRP12270 MIR30D-201ENST00000362283 70 ntBASIC-0.34□□□□□ -2.46
TPRP12270 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.34□□□□□ -2.46
TPRP12270 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-324P-201ENST00000363957 106 ntBASIC-0.34□□□□□ -2.46
TPRP12270 MIR122-201ENST00000385044 85 ntBASIC-0.34□□□□□ -2.46
TPRP12270 MIR196A1-201ENST00000388006 70 ntBASIC-0.34□□□□□ -2.46
TPRP12270 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.34□□□□□ -2.46
TPRP12270 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.34□□□□□ -2.46
TPRP12270 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.34□□□□□ -2.46
TPRP12270 MTND1P17-201ENST00000448961 204 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AL033528.1-201ENST00000453780 140 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-437P-201ENST00000459408 95 ntBASIC-0.34□□□□□ -2.46
TPRP12270 SNORD123-201ENST00000459473 70 ntBASIC-0.34□□□□□ -2.46
TPRP12270 CCDC34P1-201ENST00000507441 517 ntBASIC-0.34□□□□□ -2.46
TPRP12270 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.34□□□□□ -2.46
TPRP12270 SNORD22.1-201ENST00000516331 125 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNA5SP47-201ENST00000517230 109 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AP003733.2-201ENST00000529409 171 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.34□□□□□ -2.46
TPRP12270 FRG2DP-202ENST00000566967 323 ntBASIC-0.34□□□□□ -2.46
TPRP12270 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AC121247.2-201ENST00000604776 136 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AL590491.3-201ENST00000610731 82 ntBASIC-0.34□□□□□ -2.46
TPRP12270 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.34□□□□□ -2.46
TPRP12270 AC022960.3-201ENST00000619794 441 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AP000720.1-201ENST00000625091 483 ntBASIC-0.34□□□□□ -2.46
TPRP12270 AC073869.9-201ENST00000641610 120 ntBASIC-0.34□□□□□ -2.46
TPRP12270 RNU6-254P-201ENST00000363377 107 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-214P-201ENST00000384130 107 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU2-61P-201ENST00000411069 191 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.35□□□□□ -2.47
TPRP12270 FCF1P9-201ENST00000412546 282 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.35□□□□□ -2.47
TPRP12270 MTCO2P19-201ENST00000427513 598 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU7-73P-201ENST00000458743 63 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-625P-201ENST00000459412 107 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC010655.3-201ENST00000478818 450 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU2-13P-201ENST00000515909 113 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-759P-201ENST00000516740 103 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPRP12270 MIR4752-201ENST00000579672 72 ntBASIC-0.35□□□□□ -2.47
TPRP12270 MIR4491-201ENST00000581087 68 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AP003357.1-201ENST00000604497 148 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC023510.2-201ENST00000622162 746 ntBASIC-0.35□□□□□ -2.47
TPRP12270 uc_338.36-201ENST00000622331 158 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC091931.1-201ENST00000623488 728 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.35□□□□□ -2.47
TPRP12270 SNORD113-7-201ENST00000363762 77 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNA5SP192-201ENST00000364404 120 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-318P-201ENST00000384283 103 ntBASIC-0.35□□□□□ -2.47
TPRP12270 RNU6-601P-201ENST00000384540 107 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.35□□□□□ -2.47
TPRP12270 MIR517A-201ENST00000385001 87 ntBASIC-0.35□□□□□ -2.47
TPRP12270 MT-TY-201ENST00000387409 66 ntBASIC-0.35□□□□□ -2.47
TPRP12270 SNORA36B-201ENST00000410438 131 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC096949.1-201ENST00000412047 152 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPRP12270 AC236972.2-201ENST00000434979 310 ntBASIC-0.35□□□□□ -2.47
TPRP12270 MIR3115-201ENST00000577915 68 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AL357078.3-201ENST00000607528 618 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC004223.4-201ENST00000612426 332 ntBASIC-0.35□□□□□ -2.47
TPRP12270 MIR6082-201ENST00000613604 109 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AP001282.2-201ENST00000616149 309 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC073534.2-201ENST00000620377 381 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC022140.2-201ENST00000623500 188 ntBASIC-0.35□□□□□ -2.47
TPRP12270 AC091304.10-201ENST00000641554 121 ntBASIC-0.35□□□□□ -2.47
TPRP12270 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.36□□□□□ -2.47
TPRP12270 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.36□□□□□ -2.47
TPRP12270 SNORA27-201ENST00000384323 126 ntBASIC-0.36□□□□□ -2.47
TPRP12270 RNU6-790P-201ENST00000384479 105 ntBASIC-0.36□□□□□ -2.47
TPRP12270 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.36□□□□□ -2.47
TPRP12270 SNORA75.4-201ENST00000391278 119 ntBASIC-0.36□□□□□ -2.47
TPRP12270 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.36□□□□□ -2.47
TPRP12270 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.36□□□□□ -2.47
TPRP12270 AL354751.2-201ENST00000415471 210 ntBASIC-0.36□□□□□ -2.47
TPRP12270 MTCO1P20-201ENST00000425366 358 ntBASIC-0.36□□□□□ -2.47
TPRP12270 PRDX4P1-201ENST00000507189 574 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms