Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORD115-15-201ENST00000364809 81 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-1-201ENST00000364961 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-26-201ENST00000365067 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-10-201ENST00000365073 81 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-43-201ENST00000365503 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-36-201ENST00000365629 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-481P-201ENST00000384194 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-576P-201ENST00000390854 102 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-131P-201ENST00000391144 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 snoU13.6-201ENST00000458785 104 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU7-104P-201ENST00000459398 79 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-410P-201ENST00000517006 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL6A3P12111 FRG2DP-202ENST00000566967 323 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MTND3P13-201ENST00000574391 343 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-40-201ENST00000606510 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-227P-201ENST00000362865 103 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MIR518F-201ENST00000384973 87 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNA5SP494-201ENST00000410653 129 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-602P-201ENST00000411155 105 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MIR20A-201ENST00000362279 71 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORA72-201ENST00000384339 132 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORA72.6-201ENST00000384520 129 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MTND1P32-201ENST00000433043 938 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-830P-201ENST00000516353 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-175P-201ENST00000516896 107 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 AC060788.1-201ENST00000521318 469 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 UBL5P4-201ENST00000562584 236 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 MIR4473-201ENST00000583731 91 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 AC073648.5-201ENST00000603502 305 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 AL136370.1-201ENST00000608166 691 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNU6-702P-201ENST00000364982 107 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU6-827P-201ENST00000365553 106 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 MIR527-201ENST00000385244 85 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC010587.1-201ENST00000505809 469 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC010598.1-201ENST00000510378 103 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU7-51P-201ENST00000516560 62 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU6-107P-201ENST00000516643 102 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC005776.1-201ENST00000603164 290 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC026741.1-201ENST00000605892 482 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC008873.1-201ENST00000625051 138 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 MTND2P18-201ENST00000419962 1030 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.7□□□□□ -2.52
COL6A3P12111 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.7□□□□□ -2.52
COL6A3P12111 RNU6-437P-201ENST00000459408 95 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 RPS29P24-201ENST00000486345 171 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 MIR4756-201ENST00000577874 78 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.7□□□□□ -2.52
COL6A3P12111 AP002782.1-201ENST00000623107 614 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 AC127459.3-201ENST00000624328 466 ntBASIC-0.7□□□□□ -2.52
COL6A3P12111 SNORA72.3-201ENST00000365074 132 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-393P-201ENST00000384475 107 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 YWHAEP3-201ENST00000582767 121 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 MIR8055-201ENST00000610739 97 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
COL6A3P12111 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-442P-201ENST00000383968 104 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-708P-201ENST00000384217 107 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-136P-201ENST00000384663 107 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNA5SP86-201ENST00000390869 98 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.71□□□□□ -2.52
COL6A3P12111 MTCO2P3-201ENST00000442543 421 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AP000542.1-201ENST00000448473 371 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AC100767.1-201ENST00000528178 123 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.71□□□□□ -2.52
COL6A3P12111 MIR5708-201ENST00000579723 85 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AC092574.1-201ENST00000609771 420 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-905P-201ENST00000384434 107 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-541P-201ENST00000384709 110 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 MIR147A-201ENST00000385079 72 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-588P-201ENST00000410281 105 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AL590623.1-201ENST00000427864 105 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 SNORA25.16-201ENST00000516741 121 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU6-685P-201ENST00000517088 95 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AC007012.1-201ENST00000567192 175 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AL121655.1-201ENST00000605811 308 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 AC019226.2-201ENST00000625973 424 ntBASIC-0.71□□□□□ -2.52
COL6A3P12111 RNU4-92P-201ENST00000363783 136 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 MIR626-201ENST00000385032 94 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.72□□□□□ -2.52
COL6A3P12111 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 AL137792.2-201ENST00000443484 235 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 MTCO1P29-201ENST00000496868 288 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 RNU2-13P-201ENST00000515909 113 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms