Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RNU6-1272P-201ENST00000362776 107 ntBASIC0.93□□□□□ -2.26
KRT3P12035 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
KRT3P12035 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
KRT3P12035 RNU6-1067P-201ENST00000384752 107 ntBASIC0.93□□□□□ -2.26
KRT3P12035 RNU6-713P-201ENST00000384761 107 ntBASIC0.93□□□□□ -2.26
KRT3P12035 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
KRT3P12035 U8.17-201ENST00000391292 132 ntBASIC0.93□□□□□ -2.26
KRT3P12035 RNU6-985P-201ENST00000410182 104 ntBASIC0.93□□□□□ -2.26
KRT3P12035 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
KRT3P12035 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.93□□□□□ -2.26
KRT3P12035 RNU7-21P-201ENST00000459430 62 ntBASIC0.93□□□□□ -2.26
KRT3P12035 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.93□□□□□ -2.26
KRT3P12035 PRELID3BP2-201ENST00000605362 201 ntBASIC0.93□□□□□ -2.26
KRT3P12035 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
KRT3P12035 snoU18.1-201ENST00000629629 71 ntBASIC0.93□□□□□ -2.26
KRT3P12035 MIR4251-201ENST00000635819 61 ntBASIC0.93□□□□□ -2.26
KRT3P12035 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
KRT3P12035 Y_RNA.84-201ENST00000363011 104 ntBASIC0.92□□□□□ -2.26
KRT3P12035 RNU4-10P-201ENST00000364383 140 ntBASIC0.92□□□□□ -2.26
KRT3P12035 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
KRT3P12035 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
KRT3P12035 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
KRT3P12035 Y_RNA.676-201ENST00000516393 96 ntBASIC0.92□□□□□ -2.26
KRT3P12035 SNORA27.4-201ENST00000516650 95 ntBASIC0.92□□□□□ -2.26
KRT3P12035 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
KRT3P12035 AC008133.2-201ENST00000624540 351 ntBASIC0.92□□□□□ -2.26
KRT3P12035 Y_RNA.512-201ENST00000384518 102 ntBASIC0.91□□□□□ -2.26
KRT3P12035 Y_RNA.587-201ENST00000391210 103 ntBASIC0.91□□□□□ -2.26
KRT3P12035 AL731563.1-201ENST00000442202 214 ntBASIC0.91□□□□□ -2.26
KRT3P12035 SNORD11-201ENST00000459124 84 ntBASIC0.91□□□□□ -2.26
KRT3P12035 MTATP8P1-201ENST00000467115 207 ntBASIC0.91□□□□□ -2.26
KRT3P12035 RNU6-635P-201ENST00000516651 102 ntBASIC0.91□□□□□ -2.26
KRT3P12035 RNU7-149P-201ENST00000516739 59 ntBASIC0.91□□□□□ -2.26
KRT3P12035 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRT3P12035 AC136443.5-201ENST00000603741 370 ntBASIC0.91□□□□□ -2.26
KRT3P12035 RNA5SP48-201ENST00000363969 126 ntBASIC0.9□□□□□ -2.27
KRT3P12035 Y_RNA.242-201ENST00000364473 110 ntBASIC0.9□□□□□ -2.27
KRT3P12035 Y_RNA.276-201ENST00000364732 109 ntBASIC0.9□□□□□ -2.27
KRT3P12035 SNORD114-24-201ENST00000365029 72 ntBASIC0.9□□□□□ -2.27
KRT3P12035 RNU6-1227P-201ENST00000383981 107 ntBASIC0.9□□□□□ -2.27
KRT3P12035 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.9□□□□□ -2.27
KRT3P12035 AL603910.2-201ENST00000407268 136 ntBASIC0.9□□□□□ -2.27
KRT3P12035 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.9□□□□□ -2.27
KRT3P12035 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.9□□□□□ -2.27
KRT3P12035 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
KRT3P12035 RNU6-1338P-201ENST00000516328 91 ntBASIC0.9□□□□□ -2.27
KRT3P12035 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
KRT3P12035 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.9□□□□□ -2.27
KRT3P12035 AP003072.1-201ENST00000531740 145 ntBASIC0.9□□□□□ -2.27
KRT3P12035 MIR4781-201ENST00000585250 76 ntBASIC0.9□□□□□ -2.27
KRT3P12035 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.9□□□□□ -2.27
KRT3P12035 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
KRT3P12035 Y_RNA.24-201ENST00000362508 103 ntBASIC0.89□□□□□ -2.27
KRT3P12035 Y_RNA.370-201ENST00000365589 108 ntBASIC0.89□□□□□ -2.27
KRT3P12035 SNORA51.10-201ENST00000384418 136 ntBASIC0.89□□□□□ -2.27
KRT3P12035 MIR1185-1-201ENST00000408598 86 ntBASIC0.89□□□□□ -2.27
KRT3P12035 SERF1AP1-201ENST00000514575 187 ntBASIC0.89□□□□□ -2.27
KRT3P12035 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
KRT3P12035 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
KRT3P12035 uc_338.4-201ENST00000616635 176 ntBASIC0.89□□□□□ -2.27
KRT3P12035 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KRT3P12035 Y_RNA.4-201ENST00000362333 112 ntBASIC0.88□□□□□ -2.27
KRT3P12035 Y_RNA.117-201ENST00000363294 101 ntBASIC0.88□□□□□ -2.27
KRT3P12035 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
KRT3P12035 RNU6-994P-201ENST00000410507 111 ntBASIC0.88□□□□□ -2.27
KRT3P12035 MTCYBP6-201ENST00000441810 138 ntBASIC0.88□□□□□ -2.27
KRT3P12035 Y_RNA.666-201ENST00000516187 112 ntBASIC0.88□□□□□ -2.27
KRT3P12035 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.88□□□□□ -2.27
KRT3P12035 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
KRT3P12035 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
KRT3P12035 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
KRT3P12035 AL008718.3-201ENST00000610217 321 ntBASIC0.88□□□□□ -2.27
KRT3P12035 Y_RNA.802-201ENST00000614892 130 ntBASIC0.88□□□□□ -2.27
KRT3P12035 SEPT14P17-201ENST00000617978 177 ntBASIC0.88□□□□□ -2.27
KRT3P12035 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
KRT3P12035 SNORA1.2-201ENST00000365189 134 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNU6-1289P-201ENST00000384431 106 ntBASIC0.87□□□□□ -2.27
KRT3P12035 MIR548O-201ENST00000408583 114 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNU6-1203P-201ENST00000410703 110 ntBASIC0.87□□□□□ -2.27
KRT3P12035 SNRPGP14-201ENST00000435400 219 ntBASIC0.87□□□□□ -2.27
KRT3P12035 AC107297.1-201ENST00000459991 176 ntBASIC0.87□□□□□ -2.27
KRT3P12035 TRBVB-201ENST00000477100 408 ntBASIC0.87□□□□□ -2.27
KRT3P12035 SCARNA8-201ENST00000515924 131 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNU7-25P-201ENST00000516544 62 ntBASIC0.87□□□□□ -2.27
KRT3P12035 RNA5SP102-201ENST00000516865 106 ntBASIC0.87□□□□□ -2.27
KRT3P12035 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
KRT3P12035 AC006504.6-201ENST00000590142 199 ntBASIC0.87□□□□□ -2.27
KRT3P12035 AC022140.2-201ENST00000623500 188 ntBASIC0.87□□□□□ -2.27
KRT3P12035 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
KRT3P12035 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRT3P12035 RNU6-211P-201ENST00000384047 107 ntBASIC0.86□□□□□ -2.27
KRT3P12035 Y_RNA.422-201ENST00000384054 114 ntBASIC0.86□□□□□ -2.27
KRT3P12035 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
KRT3P12035 RNU6-1109P-201ENST00000391187 107 ntBASIC0.86□□□□□ -2.27
KRT3P12035 RNA5SP496-201ENST00000391240 109 ntBASIC0.86□□□□□ -2.27
KRT3P12035 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
KRT3P12035 RNU7-67P-201ENST00000459003 62 ntBASIC0.86□□□□□ -2.27
KRT3P12035 Y_RNA.679-201ENST00000516416 91 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms