Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR5688-201ENST00000580619 83 ntBASIC1.45□□□□□ -2.18
PCNAP12004 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
PCNAP12004 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
PCNAP12004 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PCNAP12004 Y_RNA.83-201ENST00000363005 113 ntBASIC1.44□□□□□ -2.18
PCNAP12004 SNORA2.2-201ENST00000365473 135 ntBASIC1.44□□□□□ -2.18
PCNAP12004 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
PCNAP12004 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
PCNAP12004 MIR616-201ENST00000385293 97 ntBASIC1.44□□□□□ -2.18
PCNAP12004 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.44□□□□□ -2.18
PCNAP12004 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
PCNAP12004 Y_RNA.666-201ENST00000516187 112 ntBASIC1.44□□□□□ -2.18
PCNAP12004 AC015726.2-201ENST00000620112 122 ntBASIC1.44□□□□□ -2.18
PCNAP12004 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PCNAP12004 MIR411-201ENST00000362239 96 ntBASIC1.43□□□□□ -2.18
PCNAP12004 RNU6-1138P-201ENST00000365359 106 ntBASIC1.43□□□□□ -2.18
PCNAP12004 RNU6-47P-201ENST00000383866 107 ntBASIC1.43□□□□□ -2.18
PCNAP12004 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
PCNAP12004 SNORA11.2-201ENST00000408318 127 ntBASIC1.43□□□□□ -2.18
PCNAP12004 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
PCNAP12004 RN7SKP164-201ENST00000516138 266 ntBASIC1.43□□□□□ -2.18
PCNAP12004 SNORA18.7-201ENST00000516910 131 ntBASIC1.43□□□□□ -2.18
PCNAP12004 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
PCNAP12004 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PCNAP12004 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
PCNAP12004 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
PCNAP12004 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.43□□□□□ -2.18
PCNAP12004 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PCNAP12004 Y_RNA.91-201ENST00000363042 107 ntBASIC1.42□□□□□ -2.18
PCNAP12004 SNORD45.3-201ENST00000363836 72 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU6-1065P-201ENST00000384513 106 ntBASIC1.42□□□□□ -2.18
PCNAP12004 MIR136-201ENST00000385207 82 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU6-1228P-201ENST00000391014 107 ntBASIC1.42□□□□□ -2.18
PCNAP12004 AL591806.2-201ENST00000433122 173 ntBASIC1.42□□□□□ -2.18
PCNAP12004 SNRPGP8-201ENST00000454064 226 ntBASIC1.42□□□□□ -2.18
PCNAP12004 COX6CP14-201ENST00000469580 174 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU6-947P-201ENST00000516264 106 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU7-25P-201ENST00000516544 62 ntBASIC1.42□□□□□ -2.18
PCNAP12004 RNU6-165P-201ENST00000517170 99 ntBASIC1.42□□□□□ -2.18
PCNAP12004 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
PCNAP12004 AL513534.2-201ENST00000603836 250 ntBASIC1.42□□□□□ -2.18
PCNAP12004 AL391903.3-201ENST00000612158 163 ntBASIC1.42□□□□□ -2.18
PCNAP12004 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.42□□□□□ -2.18
PCNAP12004 SNORD33-201ENST00000362761 85 ntBASIC1.41□□□□□ -2.18
PCNAP12004 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
PCNAP12004 RNU6-484P-201ENST00000384016 107 ntBASIC1.41□□□□□ -2.18
PCNAP12004 SNORD38C-201ENST00000384381 69 ntBASIC1.41□□□□□ -2.18
PCNAP12004 MIR548O-201ENST00000408583 114 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.41□□□□□ -2.18
PCNAP12004 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AC022559.1-201ENST00000520905 205 ntBASIC1.41□□□□□ -2.18
PCNAP12004 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
PCNAP12004 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AC006441.5-201ENST00000612680 209 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AC141273.2-201ENST00000618989 130 ntBASIC1.41□□□□□ -2.18
PCNAP12004 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
PCNAP12004 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
PCNAP12004 Y_RNA.7-201ENST00000362352 102 ntBASIC1.4□□□□□ -2.19
PCNAP12004 Y_RNA.238-201ENST00000364441 102 ntBASIC1.4□□□□□ -2.19
PCNAP12004 Y_RNA.571-201ENST00000384753 98 ntBASIC1.4□□□□□ -2.19
PCNAP12004 RNU6-918P-201ENST00000391219 106 ntBASIC1.4□□□□□ -2.19
PCNAP12004 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
PCNAP12004 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.4□□□□□ -2.19
PCNAP12004 RNU6-1270P-201ENST00000517128 108 ntBASIC1.4□□□□□ -2.19
PCNAP12004 AC007751.1-201ENST00000529260 376 ntBASIC1.4□□□□□ -2.19
PCNAP12004 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
PCNAP12004 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
PCNAP12004 Y_RNA.182-201ENST00000363880 111 ntBASIC1.39□□□□□ -2.19
PCNAP12004 Y_RNA.297-201ENST00000364950 91 ntBASIC1.39□□□□□ -2.19
PCNAP12004 Y_RNA.515-201ENST00000384535 112 ntBASIC1.39□□□□□ -2.19
PCNAP12004 Y_RNA.547-201ENST00000384654 119 ntBASIC1.39□□□□□ -2.19
PCNAP12004 Y_RNA.552-201ENST00000384665 112 ntBASIC1.39□□□□□ -2.19
PCNAP12004 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
PCNAP12004 MIR764-201ENST00000390811 85 ntBASIC1.39□□□□□ -2.19
PCNAP12004 SNORD28B-201ENST00000390993 75 ntBASIC1.39□□□□□ -2.19
PCNAP12004 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
PCNAP12004 SNORD123-201ENST00000459473 70 ntBASIC1.39□□□□□ -2.19
PCNAP12004 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.39□□□□□ -2.19
PCNAP12004 RNU6-138P-201ENST00000515952 107 ntBASIC1.39□□□□□ -2.19
PCNAP12004 RNU6-1299P-201ENST00000516316 100 ntBASIC1.39□□□□□ -2.19
PCNAP12004 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
PCNAP12004 RNU7-181P-201ENST00000517234 74 ntBASIC1.39□□□□□ -2.19
PCNAP12004 MIR4744-201ENST00000581563 82 ntBASIC1.39□□□□□ -2.19
PCNAP12004 AC090425.1-201ENST00000610007 140 ntBASIC1.39□□□□□ -2.19
PCNAP12004 AC108706.1-201ENST00000611053 297 ntBASIC1.39□□□□□ -2.19
PCNAP12004 AL442644.1-201ENST00000454390 3105 ntBASIC1.39□□□□□ -2.19
PCNAP12004 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PCNAP12004 Y_RNA.432-201ENST00000384087 111 ntBASIC1.38□□□□□ -2.19
PCNAP12004 SNORD61-201ENST00000384252 73 ntBASIC1.38□□□□□ -2.19
PCNAP12004 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
PCNAP12004 Y_RNA.797-201ENST00000515977 94 ntBASIC1.38□□□□□ -2.19
PCNAP12004 SNORD111.1-201ENST00000516421 86 ntBASIC1.38□□□□□ -2.19
PCNAP12004 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
PCNAP12004 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
PCNAP12004 AC109810.1-201ENST00000534066 224 ntBASIC1.38□□□□□ -2.19
PCNAP12004 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
PCNAP12004 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
PCNAP12004 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms