Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 BX284668.6-201ENST00000606899 438 ntBASIC1.09□□□□□ -2.23
SMIM18P0DKX4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 RNY3P5-201ENST00000384127 102 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 SNORA67.5-201ENST00000391036 107 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 U8.17-201ENST00000391292 132 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 MIR1302-3-201ENST00000408128 138 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 RNU4-10P-201ENST00000364383 140 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 MIR4643-201ENST00000577473 78 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 AC099654.10-201ENST00000640395 161 ntBASIC1.07□□□□□ -2.24
SMIM18P0DKX4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMIM18P0DKX4 RNA5SP264-201ENST00000363115 107 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 SNORA1.2-201ENST00000365189 134 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 SNORD58.1-201ENST00000391313 66 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 MIR548H3-201ENST00000408771 118 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.668-201ENST00000516233 93 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 AL365265.1-201ENST00000621045 234 ntBASIC1.06□□□□□ -2.24
SMIM18P0DKX4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
SMIM18P0DKX4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SMIM18P0DKX4 RNA5SP48-201ENST00000363969 126 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 RNA5SP190-201ENST00000365222 118 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 SNORD28B-201ENST00000390993 75 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 SNORA40.6-201ENST00000391153 128 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.05□□□□□ -2.24
SMIM18P0DKX4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.05□□□□□ -2.24
SMIM18P0DKX4 RNU2-13P-201ENST00000515909 113 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 RNU11-2P-201ENST00000516898 142 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 AL353621.2-201ENST00000605340 133 ntBASIC1.05□□□□□ -2.24
SMIM18P0DKX4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
SMIM18P0DKX4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMIM18P0DKX4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SMIM18P0DKX4 RNU6-653P-201ENST00000363074 106 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.416-201ENST00000384014 113 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 MIR616-201ENST00000385293 97 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 MIR548O-201ENST00000408583 114 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 RNU2-38P-201ENST00000410856 79 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
SMIM18P0DKX4 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC108210.2-201ENST00000503681 201 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC011921.3-201ENST00000605540 361 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AL442067.1-201ENST00000613261 223 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC015726.2-201ENST00000620112 122 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 AC008133.2-201ENST00000624540 351 ntBASIC1.04□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 SNORD24-201ENST00000383884 75 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 SNORA26-201ENST00000391286 122 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 MTND3P2-201ENST00000438452 342 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 RNA5SP153-201ENST00000516498 76 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 RNU6-365P-201ENST00000517113 106 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
SMIM18P0DKX4 AC104984.5-201ENST00000586878 94 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 U4.1-201ENST00000620349 87 ntBASIC1.03□□□□□ -2.24
SMIM18P0DKX4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 Y_RNA.478-201ENST00000384358 107 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 MIR1289-2-201ENST00000408360 111 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 RNU6-847P-201ENST00000411115 108 ntBASIC1.02□□□□□ -2.25
SMIM18P0DKX4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
SMIM18P0DKX4 AC063976.4-201ENST00000421971 163 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms